LICENSE
MANIFEST.in
README.md
pyproject.toml
setup.cfg
setup.py
LiPydomics.egg-info/PKG-INFO
LiPydomics.egg-info/SOURCES.txt
LiPydomics.egg-info/dependency_links.txt
LiPydomics.egg-info/requires.txt
LiPydomics.egg-info/top_level.txt
LiPydomics.egg-info/zip-safe
lipydomics/__init__.py
lipydomics/data.py
lipydomics/interactive.py
lipydomics/plotting.py
lipydomics/stats.py
lipydomics/util.py
lipydomics/identification/__init__.py
lipydomics/identification/build_database.py
lipydomics/identification/build_params.py
lipydomics/identification/characterize_lipid_ccs_pred.py
lipydomics/identification/characterize_lipid_rt_pred.py
lipydomics/identification/db_table_defs.py
lipydomics/identification/encoder_params.py
lipydomics/identification/fill_measured_from_src.py
lipydomics/identification/fill_theo_mz_from_gen.py
lipydomics/identification/id_levels.py
lipydomics/identification/lipid_ccs_pred.pickle
lipydomics/identification/lipid_ccs_scale.pickle
lipydomics/identification/lipid_rt_pred.pickle
lipydomics/identification/lipid_rt_scale.pickle
lipydomics/identification/lipids.db
lipydomics/identification/mz_generation.py
lipydomics/identification/rt_calibration.py
lipydomics/identification/train_lipid_ccs_pred.py
lipydomics/identification/train_lipid_rt_pred.py
lipydomics/identification/LipidMass/__init__.py
lipydomics/identification/LipidMass/base.py
lipydomics/identification/LipidMass/monoiso.py
lipydomics/identification/LipidMass/lipids/__init__.py
lipydomics/identification/LipidMass/lipids/glycerolipids.py
lipydomics/identification/LipidMass/lipids/glycerophospholipids.py
lipydomics/identification/LipidMass/lipids/glycolipids.py
lipydomics/identification/LipidMass/lipids/lysoglycerophospholipids.py
lipydomics/identification/LipidMass/lipids/misc.py
lipydomics/identification/LipidMass/lipids/sphingolipids/__init__.py
lipydomics/identification/LipidMass/lipids/sphingolipids/gangliosides.py
lipydomics/identification/builds/build_log_2108240850.txt
lipydomics/identification/builds/lipids_2108240850.db
lipydomics/identification/ccs_pred_perf/100_FA_[M-H]-.png
lipydomics/identification/ccs_pred_perf/10_Cer_[M+H-H2O]+.png
lipydomics/identification/ccs_pred_perf/10_Cer_[M+HCOO]-.png
lipydomics/identification/ccs_pred_perf/10_GlcCer_[M+H-H2O]+.png
lipydomics/identification/ccs_pred_perf/10_GlcCer_[M+HCOO]-.png
lipydomics/identification/ccs_pred_perf/10_MGDGo_[M+NH4]+.png
lipydomics/identification/ccs_pred_perf/10_PGp_[M-H]-.png
lipydomics/identification/ccs_pred_perf/11_Cer_[M+Na]+.png
lipydomics/identification/ccs_pred_perf/11_DGDG_[M+HCOO]-.png
lipydomics/identification/ccs_pred_perf/11_PA_[M+2Na-H]+.png
lipydomics/identification/ccs_pred_perf/128_PG_[M-H]-.png
lipydomics/identification/ccs_pred_perf/12_PA_[M+Na]+.png
lipydomics/identification/ccs_pred_perf/12_PC_[M+Cl]-.png
lipydomics/identification/ccs_pred_perf/12_PI_[M+H]+.png
lipydomics/identification/ccs_pred_perf/135_PC_[M+CH3COO]-.png
lipydomics/identification/ccs_pred_perf/136_PE_[M+H]+.png
lipydomics/identification/ccs_pred_perf/13_DGo_[M+NH4]+.png
lipydomics/identification/ccs_pred_perf/13_MGDG_[M+HCOO]-.png
lipydomics/identification/ccs_pred_perf/13_PGo_[M-H]-.png
lipydomics/identification/ccs_pred_perf/140_PEp_[M+H]+.png
lipydomics/identification/ccs_pred_perf/143_DG_[M+NH4]+.png
lipydomics/identification/ccs_pred_perf/14_AcylPG_[M-H]-.png
lipydomics/identification/ccs_pred_perf/14_PI_[M+NH4]+.png
lipydomics/identification/ccs_pred_perf/15_PEo_[M+2Na-H]+.png
lipydomics/identification/ccs_pred_perf/161_PEo_[M-H]-.png
lipydomics/identification/ccs_pred_perf/16_MGDG_[M+CH3COO]-.png
lipydomics/identification/ccs_pred_perf/16_PSo_[M-H]-.png
lipydomics/identification/ccs_pred_perf/192_PE_[M-H]-.png
lipydomics/identification/ccs_pred_perf/19_LPEo_[M+H]+.png
lipydomics/identification/ccs_pred_perf/20_SM_[M+HCOO]-.png
lipydomics/identification/ccs_pred_perf/21_LPEo_[M-H]-.png
lipydomics/identification/ccs_pred_perf/21_LPG_[M-H]-.png
lipydomics/identification/ccs_pred_perf/21_PE_[M+2Na-H]+.png
lipydomics/identification/ccs_pred_perf/21_PEp_[M-H]-.png
lipydomics/identification/ccs_pred_perf/22_DGDG_[M+Na]+.png
lipydomics/identification/ccs_pred_perf/22_LPE_[M+Na]+.png
lipydomics/identification/ccs_pred_perf/236_PC_[M+H]+.png
lipydomics/identification/ccs_pred_perf/23_LysylPG_[M+H]+.png
lipydomics/identification/ccs_pred_perf/24_GlcCer_[M+H]+.png
lipydomics/identification/ccs_pred_perf/25_MGDG_[M+NH4]+.png
lipydomics/identification/ccs_pred_perf/25_SM_[M+Na]+.png
lipydomics/identification/ccs_pred_perf/26_MGDGo_[M+CH3COO]-.png
lipydomics/identification/ccs_pred_perf/27_LPS_[M-H]-.png
lipydomics/identification/ccs_pred_perf/28_Cer_[M+H]+.png
lipydomics/identification/ccs_pred_perf/28_Cerd_[M+H]+.png
lipydomics/identification/ccs_pred_perf/28_PI_[M+Na]+.png
lipydomics/identification/ccs_pred_perf/29_GlcCer_[M+Na]+.png
lipydomics/identification/ccs_pred_perf/30_PEo_[M+H]+.png
lipydomics/identification/ccs_pred_perf/32_LPC_[M+CH3COO]-.png
lipydomics/identification/ccs_pred_perf/32_PS_[M+2Na-H]+.png
lipydomics/identification/ccs_pred_perf/33_PC_[M+HCOO]-.png
lipydomics/identification/ccs_pred_perf/38_PG_[M+Na]+.png
lipydomics/identification/ccs_pred_perf/39_TGo_[M+Na]+.png
lipydomics/identification/ccs_pred_perf/414_TG_[M+Na]+.png
lipydomics/identification/ccs_pred_perf/42_CE_[M+NH4]+.png
lipydomics/identification/ccs_pred_perf/42_PS_[M+Na]+.png
lipydomics/identification/ccs_pred_perf/46_LPC_[M+Na]+.png
lipydomics/identification/ccs_pred_perf/48_PA_[M-H]-.png
lipydomics/identification/ccs_pred_perf/50_LPE_[M+H]+.png
lipydomics/identification/ccs_pred_perf/51_DGDG_[M+NH4]+.png
lipydomics/identification/ccs_pred_perf/51_SM_[M+H]+.png
lipydomics/identification/ccs_pred_perf/59_LPE_[M-H]-.png
lipydomics/identification/ccs_pred_perf/5_LPCo_[M+CH3COO]-.png
lipydomics/identification/ccs_pred_perf/5_LPGo_[M-H]-.png
lipydomics/identification/ccs_pred_perf/60_PI_[M-H]-.png
lipydomics/identification/ccs_pred_perf/62_LPC_[M+H]+.png
lipydomics/identification/ccs_pred_perf/66_PE_[M+Na]+.png
lipydomics/identification/ccs_pred_perf/72_TGo_[M+NH4]+.png
lipydomics/identification/ccs_pred_perf/75_PCo_[M+CH3COO]-.png
lipydomics/identification/ccs_pred_perf/76_PC_[M+Na]+.png
lipydomics/identification/ccs_pred_perf/779_TG_[M+NH4]+.png
lipydomics/identification/ccs_pred_perf/79_PS_[M-H]-.png
lipydomics/identification/ccs_pred_perf/84_PS_[M+H]+.png
lipydomics/identification/ccs_pred_perf/9_DGDG_[M+CH3COO]-.png
lipydomics/identification/reference_data/blaz0818.json
lipydomics/identification/reference_data/groe0815.json
lipydomics/identification/reference_data/hine0119.json
lipydomics/identification/reference_data/hine0217.json
lipydomics/identification/reference_data/hine0520.json
lipydomics/identification/reference_data/hine1217.json
lipydomics/identification/reference_data/leap0219.json
lipydomics/identification/reference_data/may_0114.json
lipydomics/identification/reference_data/pagl1214.json
lipydomics/identification/reference_data/tsug0220_neg.json
lipydomics/identification/reference_data/tsug0220_neg_corr.json
lipydomics/identification/reference_data/tsug0220_pos.json
lipydomics/identification/reference_data/vasi0120_neg.json
lipydomics/identification/reference_data/vasi0120_neg_corr.json
lipydomics/identification/reference_data/vasi0120_pos.json
lipydomics/identification/reference_data/zhou0817.json
lipydomics/identification/rt_pred_perf/10_PGp.png
lipydomics/identification/rt_pred_perf/11_AcylPE.png
lipydomics/identification/rt_pred_perf/12_LPG.png
lipydomics/identification/rt_pred_perf/13_MGDG.png
lipydomics/identification/rt_pred_perf/14_GlcCerd.png
lipydomics/identification/rt_pred_perf/18_AcylPG.png
lipydomics/identification/rt_pred_perf/24_LysylPG.png
lipydomics/identification/rt_pred_perf/26_Cerd.png
lipydomics/identification/rt_pred_perf/27_PA.png
lipydomics/identification/rt_pred_perf/29_PI.png
lipydomics/identification/rt_pred_perf/2_PIP.png
lipydomics/identification/rt_pred_perf/34_PC.png
lipydomics/identification/rt_pred_perf/35_PEp.png
lipydomics/identification/rt_pred_perf/38_CL.png
lipydomics/identification/rt_pred_perf/58_PE.png
lipydomics/identification/rt_pred_perf/59_LPE.png
lipydomics/identification/rt_pred_perf/6_DG.png
lipydomics/identification/rt_pred_perf/6_GlcADG.png
lipydomics/identification/rt_pred_perf/7_LPC.png
lipydomics/identification/rt_pred_perf/7_PS.png
lipydomics/identification/rt_pred_perf/83_DGDG.png
lipydomics/identification/rt_pred_perf/8_SMd.png
lipydomics/identification/rt_pred_perf/93_PG.png
lipydomics/identification/rt_pred_perf/9_LPEp.png
lipydomics/test/__init__.py
lipydomics/test/__main__.py
lipydomics/test/data.py
lipydomics/test/external_real1.txt
lipydomics/test/identification.py
lipydomics/test/interactive.py
lipydomics/test/lipids_1.txt
lipydomics/test/mock_data_1.csv
lipydomics/test/mock_data_2.csv
lipydomics/test/plotting.py
lipydomics/test/real1_features1.csv
lipydomics/test/real_data_1.csv
lipydomics/test/rt_calibration.py
lipydomics/test/rtc_1.csv
lipydomics/test/rtc_2.csv
lipydomics/test/stats.py
lipydomics/test/util.py