LICENSE
README.md
pyproject.toml
docs/src/conf.py
gtdb_gtranslate.egg-info/PKG-INFO
gtdb_gtranslate.egg-info/SOURCES.txt
gtdb_gtranslate.egg-info/dependency_links.txt
gtdb_gtranslate.egg-info/entry_points.txt
gtdb_gtranslate.egg-info/requires.txt
gtdb_gtranslate.egg-info/top_level.txt
gtranslate/__init__.py
gtranslate/__main__.py
gtranslate/cli.py
gtranslate/exceptions.py
gtranslate/main.py
gtranslate/misc.py
gtranslate/tbl_predictor.py
gtranslate/tools.py
gtranslate/training_manager.py
gtranslate/biolib_lite/__init__.py
gtranslate/biolib_lite/common.py
gtranslate/biolib_lite/custom_help_formatter.py
gtranslate/biolib_lite/exceptions.py
gtranslate/biolib_lite/execute.py
gtranslate/biolib_lite/logger.py
gtranslate/biolib_lite/parallel.py
gtranslate/biolib_lite/prodigal_runner.py
gtranslate/biolib_lite/seq_io.py
gtranslate/biolib_lite/seq_tk.py
gtranslate/classifiers/ensemble_predictor.py
gtranslate/classifiers/table_classifiers.py
gtranslate/classifiers/classifier_models/__init__.py
gtranslate/classifiers/classifiers_parameters/__init__.py
gtranslate/classifiers/classifiers_parameters/classifier_parameters.py
gtranslate/config/__init__.py
gtranslate/config/common.py
gtranslate/config/output.py
gtranslate/external/__init__.py
gtranslate/external/prodigal.py
gtranslate/files/__init__.py
gtranslate/files/batchfile.py
gtranslate/files/featurefile.py
gtranslate/files/prodigal/__init__.py
gtranslate/files/prodigal/tln_table.py
gtranslate/files/prodigal/tln_table_summary.py
gtranslate/plots/__init__.py
gtranslate/plots/plotter.py
manuscript/v1/scripts/classifier_parameters.py
manuscript/v1/scripts/generate_training_set.py
manuscript/v1/scripts/script_logger.py
manuscript/v1/scripts/train_classifier_multi.py
scripts/evaluate_misclassifications.py
scripts/gtdb_training_set.py
scripts/run_gtranslate_in_chunks.py
tests/__init__.py
tests/test_exceptions.py
tests/test_misc.py
tests/test_tools.py