adjustText
anndata>=0.12.4
bioio<2
bioio-nd2
bioio-tifffile
centrosome
cp-measure>=0.1.16
dask-image
dask!=2025.12.0,!=2026.1.0,!=2026.1.1,!=2026.1.2
decorator
filelock
flox
fsspec!=2023.9.0
igraph
itk-elastix
itk
joblib
kneed
mahotas
matplotlib
natsort
numcodecs
numpy
ome-zarr<0.12.0
pandas
pint
psutil
pyarrow
pydantic
scikit-image
scikit-learn
scipy
seaborn
shapely
stardist
statsmodels
tensorflow
tifffile<=2025.5.10
xarray
zarr<3

[cellpose]
cellpose<4

[dask-ml]
dask-ml

[dev]
pre-commit

[dialout]
pysam

[doc]
ipython
nbsphinx
sphinx-copybutton
sphinx
sphinx_argparse
sphinx_rtd_theme

[napari]
napari
napari_ome_zarr

[test]
miniwdl
pytest
pytest-xdist

[ufish]
ufish
