LICENSE
README.md
pyproject.toml
research_companion/__init__.py
research_companion/__main__.py
research_companion/alignment.py
research_companion/chat.py
research_companion/citation_placement.py
research_companion/citations_coverage.py
research_companion/cli.py
research_companion/compare.py
research_companion/converse.py
research_companion/discover.py
research_companion/embed.py
research_companion/export.py
research_companion/extract.py
research_companion/fetch.py
research_companion/gaps.py
research_companion/graph.py
research_companion/journey.py
research_companion/lab_api.py
research_companion/prompts.py
research_companion/qa.py
research_companion/rank.py
research_companion/report.py
research_companion/retrieve.py
research_companion/sections.py
research_companion/settings.py
research_companion/store.py
research_companion/strength.py
research_companion/suggestions.py
research_companion/temporal.py
research_companion/views.py
research_companion/viz.py
research_companion/workspaces.py
research_companion.egg-info/PKG-INFO
research_companion.egg-info/SOURCES.txt
research_companion.egg-info/dependency_links.txt
research_companion.egg-info/entry_points.txt
research_companion.egg-info/requires.txt
research_companion.egg-info/top_level.txt
research_companion/agents/__init__.py
research_companion/agents/base.py
research_companion/agents/benchmark.py
research_companion/agents/bus.py
research_companion/agents/citation.py
research_companion/agents/confidence.py
research_companion/agents/events.py
research_companion/agents/ingest.py
research_companion/agents/novelty.py
research_companion/agents/orchestrator.py
research_companion/agents/priorart.py
research_companion/agents/problem.py
research_companion/agents/rebuttal.py
research_companion/agents/tracker.py
research_companion/dashboard/__init__.py
research_companion/dashboard/page.py
research_companion/dashboard/server.py
research_companion/eval/__init__.py
research_companion/eval/citation_pr.py
research_companion/eval/novelty_openreview.py
research_companion/eval/pvalue.py
research_companion/lab/__init__.py
research_companion/lab/static/index.html
research_companion/lab/static/css/lab.css
research_companion/lab/static/js/activityHelpers.js
research_companion/lab/static/js/answerHtml.js
research_companion/lab/static/js/api.js
research_companion/lab/static/js/citationsHelpers.js
research_companion/lab/static/js/format.js
research_companion/lab/static/js/glossary.js
research_companion/lab/static/js/icons.js
research_companion/lab/static/js/journeyHelpers.js
research_companion/lab/static/js/libraryHelpers.js
research_companion/lab/static/js/main.js
research_companion/lab/static/js/nextAction.js
research_companion/lab/static/js/placementHelpers.js
research_companion/lab/static/js/readerHelpers.js
research_companion/lab/static/js/reducer.js
research_companion/lab/static/js/router.js
research_companion/lab/static/js/settingsHelpers.js
research_companion/lab/static/js/snapshotRefresher.js
research_companion/lab/static/js/sse.js
research_companion/lab/static/js/store.js
research_companion/lab/static/js/theme.js
research_companion/lab/static/js/viewsHelpers.js
research_companion/lab/static/js/workspaceHelpers.js
research_companion/lab/static/js/components/citationsPanel.js
research_companion/lab/static/js/components/citeMiniCard.js
research_companion/lab/static/js/components/conversePanel.js
research_companion/lab/static/js/components/drawer.js
research_companion/lab/static/js/components/explainer.js
research_companion/lab/static/js/components/helpPanel.js
research_companion/lab/static/js/components/ingestHelpers.js
research_companion/lab/static/js/components/ingestModal.js
research_companion/lab/static/js/components/onboarding.js
research_companion/lab/static/js/components/paperCard.js
research_companion/lab/static/js/components/placementPanel.js
research_companion/lab/static/js/components/progressDock.js
research_companion/lab/static/js/components/reader.js
research_companion/lab/static/js/components/saveViewModal.js
research_companion/lab/static/js/components/suggestionHelpers.js
research_companion/lab/static/js/components/suggestionsPanel.js
research_companion/lab/static/js/components/toast.js
research_companion/lab/static/js/components/workspaceSwitcher.js
research_companion/lab/static/js/graph/draftLayout.js
research_companion/lab/static/js/graph/graphview.js
research_companion/lab/static/js/graph/mapping.js
research_companion/lab/static/js/timeline/layout.js
research_companion/lab/static/js/views/ask.js
research_companion/lab/static/js/views/compare.js
research_companion/lab/static/js/views/draft.js
research_companion/lab/static/js/views/graph.js
research_companion/lab/static/js/views/home.js
research_companion/lab/static/js/views/library.js
research_companion/lab/static/js/views/researches.js
research_companion/lab/static/js/views/settings.js
research_companion/lab/static/js/views/suggestions.js
research_companion/lab/static/js/views/timeline.js
research_companion/lab/static/vendor/vis-network.min.js
research_companion/rebuttal/__init__.py
research_companion/rebuttal/dedup.py
research_companion/rebuttal/draft.py
research_companion/rebuttal/models.py
research_companion/rebuttal/retrieve.py
research_companion/rebuttal/segment.py
research_companion/rebuttal/verify.py
research_companion/refcheck/__init__.py
research_companion/refcheck/matching.py
research_companion/refcheck/parse.py
research_companion/refcheck/retrieval.py
research_companion/refcheck/validate.py
tests/test_agents_base.py
tests/test_agents_benchmark.py
tests/test_agents_bus.py
tests/test_agents_citation.py
tests/test_agents_confidence.py
tests/test_agents_events.py
tests/test_agents_ingest.py
tests/test_agents_novelty.py
tests/test_agents_orchestrator.py
tests/test_agents_priorart.py
tests/test_agents_problem.py
tests/test_agents_tracker.py
tests/test_alignment.py
tests/test_chat_and_viz.py
tests/test_citation_placement.py
tests/test_citations_coverage.py
tests/test_cli.py
tests/test_cli_rebuttal.py
tests/test_cli_review.py
tests/test_cli_workspace.py
tests/test_compare.py
tests/test_converse.py
tests/test_dashboard.py
tests/test_demo_lab_offline.py
tests/test_discover_openalex.py
tests/test_embed.py
tests/test_eval_citation_pr.py
tests/test_eval_novelty_openreview.py
tests/test_eval_pvalue.py
tests/test_extract.py
tests/test_extract_sections.py
tests/test_fetch.py
tests/test_gaps.py
tests/test_graph.py
tests/test_graph_sections.py
tests/test_journey.py
tests/test_lab_api.py
tests/test_lab_api_activity.py
tests/test_lab_api_citations.py
tests/test_lab_api_placement.py
tests/test_lab_api_reader.py
tests/test_lab_api_workspaces.py
tests/test_lab_ingest.py
tests/test_lab_static.py
tests/test_new_features.py
tests/test_novelty_prompts.py
tests/test_packaging.py
tests/test_prompts_v2.py
tests/test_qa.py
tests/test_quote_locate.py
tests/test_rank.py
tests/test_rebuttal_dedup.py
tests/test_rebuttal_draft.py
tests/test_rebuttal_models.py
tests/test_rebuttal_prompts.py
tests/test_rebuttal_retrieve.py
tests/test_rebuttal_segment.py
tests/test_rebuttal_verify.py
tests/test_refcheck.py
tests/test_refcheck_cli.py
tests/test_refcheck_integration.py
tests/test_refcheck_parse.py
tests/test_refcheck_retrieval.py
tests/test_report.py
tests/test_retrieve.py
tests/test_sections.py
tests/test_settings.py
tests/test_store.py
tests/test_store_lab.py
tests/test_strength.py
tests/test_suggestions.py
tests/test_temporal.py
tests/test_views.py
tests/test_workspace_migration.py
tests/test_workspaces.py