CHANGELOG.md
LICENSE
MANIFEST.in
Makefile
README.md
pyproject.toml
setup.py
cpp/common.hpp
cpp/dump.cpp
cpp/encoders.hpp
cpp/extract.cpp
cpp/json_mini.hpp
cpp/merge.cpp
cpp/query.cpp
qc/QC_REPORT.md
qc/bitarray_check.py
qc/bruteforce_kmer_truth.py
qc/run_extraction_qc.sh
qc/spotcheck_real_source_absence.py
qc/test_merge_bitarrays.sh
qc/data/synthetic_homopolymer.fa
qc/data/synthetic_multirecord.fa
qc/data/synthetic_simple.fa
src/barcodesdb/__init__.py
src/barcodesdb/__main__.py
src/barcodesdb/binaries.py
src/barcodesdb/cli.py
src/barcodesdb/scheduler.py
src/barcodesdb/selftest.py
src/barcodesdb.egg-info/PKG-INFO
src/barcodesdb.egg-info/SOURCES.txt
src/barcodesdb.egg-info/dependency_links.txt
src/barcodesdb.egg-info/entry_points.txt
src/barcodesdb.egg-info/top_level.txt