LICENSE
README.md
pyproject.toml
scitoolkit/__init__.py
scitoolkit/_setup_host.py
scitoolkit/_toolkit_host.py
scitoolkit/astro.py
scitoolkit/auth.py
scitoolkit/cli.py
scitoolkit/config.py
scitoolkit/hep.py
scitoolkit/ingest.py
scitoolkit/neutrino.py
scitoolkit/quantum.py
scitoolkit/skills.py
scitoolkit/toolkit.py
scitoolkit/validation.py
scitoolkit/versioning.py
scitoolkit.egg-info/PKG-INFO
scitoolkit.egg-info/SOURCES.txt
scitoolkit.egg-info/dependency_links.txt
scitoolkit.egg-info/entry_points.txt
scitoolkit.egg-info/requires.txt
scitoolkit.egg-info/top_level.txt
scitoolkit/envs/__init__.py
scitoolkit/envs/cache.py
scitoolkit/envs/config.py
scitoolkit/envs/discovery.py
scitoolkit/envs/manifest.py
scitoolkit/envs/paths.py
scitoolkit/envs/schema.py
scitoolkit/logging/__init__.py
scitoolkit/logging/logger.py
scitoolkit/serve/__init__.py
scitoolkit/serve/config.py
scitoolkit/serve/orchestrator.py
scitoolkit/serve/proxy_tool.py
scitoolkit/serve/tool_groups.py
scitoolkit/setup/__init__.py
scitoolkit/setup/_rpc.py
scitoolkit/setup/context.py
scitoolkit/setup/declarative.py
scitoolkit/setup/downloads.py
scitoolkit/setup/prompts.py
scitoolkit/setup/runner.py
scitoolkit/setup/schema.py
scitoolkit/setup/storage.py
scitoolkit/setup/validate_cache.py
scitoolkit/templates/Dockerfile.template
scitoolkit/templates/README.md.template
scitoolkit/templates/__init__.py.template
scitoolkit/templates/requirements.txt.template
scitoolkit/templates/setup.py.template
scitoolkit/templates/tool_example.py
scitoolkit/templates/toolkit.yaml.template
scitoolkit/templates/mcp/__init__.py.template
scitoolkit/templates/mcp/server_stdio.py.template
scitoolkit/templates/skills/example_skill.md
tests/test_auth.py
tests/test_categories_api.py
tests/test_config_command.py
tests/test_create_command.py
tests/test_envs_cache.py
tests/test_envs_config.py
tests/test_envs_discovery.py
tests/test_envs_manifest.py
tests/test_envs_paths.py
tests/test_envs_phase3_wiring.py
tests/test_envs_phase4_config.py
tests/test_envs_phase5_list.py
tests/test_envs_phase6_reset.py
tests/test_envs_schema.py
tests/test_expected_toolkits.py
tests/test_host_stderr_capture.py
tests/test_ingest_ast.py
tests/test_ingest_command.py
tests/test_ingest_walker.py
tests/test_ingest_yaml_emit.py
tests/test_init_template.py
tests/test_interactive_flags.py
tests/test_login_command.py
tests/test_orchestrator_restart.py
tests/test_orchestrator_tool_groups.py
tests/test_per_toolkit_log_rotation.py
tests/test_publish_version_check.py
tests/test_serve_config.py
tests/test_serve_state_config.py
tests/test_setup_command.py
tests/test_setup_context.py
tests/test_setup_declarative.py
tests/test_setup_downloads.py
tests/test_setup_handlers.py
tests/test_setup_host.py
tests/test_setup_prompts.py
tests/test_setup_rpc.py
tests/test_setup_runner.py
tests/test_setup_schema.py
tests/test_setup_storage.py
tests/test_setup_validate_cache.py
tests/test_skills.py
tests/test_tool_groups.py
tests/test_toolkit_host_explicit_tools.py
tests/test_validation_explicit_tools.py
tests/test_versioning.py