crisscross/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
crisscross/README.md,sha256=ARJsB2o-XPWSZmguniK8NRe1lUEtVPvcUOdIcTmxwvU,13653
crisscross/plate_mapping/plate_constants.py,sha256=7pdl_2eB09g4DFYygXM3wuaUkmTx8DNy5QK0PydqGdo,5647
crisscross/plate_mapping/hash_cad_plates.py,sha256=yMNqeCVNdKBT3q3EIleQZcLlqA6GBSEzyxT8by3754E,6840
crisscross/plate_mapping/__init__.py,sha256=ouV5v2_V97L9NW0up3A9PQS_yPEYBea51AbcdMzSD6o,6998
crisscross/plate_mapping/non_standard_plates/hybrid_plates.py,sha256=YXr0r5fLZcrvne-Bes3pWKGmILkSJrxwJIM6TE2sgBo,2411
crisscross/plate_mapping/non_standard_plates/__init__.py,sha256=SzfpYadO5u5s3FFPxdcySmtnYN8_0mlCTBN9xhacOlw,2029
crisscross/plate_mapping/non_standard_plates/cargo_plates.py,sha256=z7RojBzEmRFBqVreHsiwovPrw0pCExSDdsqnD9ycgmw,2464
crisscross/plate_mapping/non_standard_plates/seed_plates.py,sha256=IcXl_UEzLdVp-Yu4VFNFjR5-68SZz7cnTPB9TULFSZg,1951
crisscross/plate_mapping/non_standard_plates/plate_concentrations.py,sha256=XxZy8Z30dxxAb6u9iyLIqsdujLAEX9lKlBLR_P-UD80,2426
crisscross/plate_mapping/non_standard_plates/old_cargo_plates.py,sha256=EgnauophwMx-WG93VGPWUwEeFynDfjUc6GxZr2_8U4M,5478
crisscross/plate_mapping/non_standard_plates/hash_cad_plate_converter.py,sha256=aBIHdnf2uqrjsLoARXqkLQmmFz6s5QUDMeAgTabONfo,8853
crisscross/plate_mapping/non_standard_plates/crisscross_plates.py,sha256=3YwJl717Xa3MXtq8sFJM3UOgGjCnJoMYwLgl9EBmfTU,2025
crisscross/plate_mapping/non_standard_plates/core_plates.py,sha256=aEMjKMCzP3GLQHS6a252xbuegxVQ-1-zr3629workh4,1943
crisscross/helper_functions/slat_salient_quantities.py,sha256=PoiweIXyUB35ABTrc_krY8P7506rCK2svdSGKomSlC4,663
crisscross/helper_functions/lab_helper_sheet_generation.py,sha256=52GqNZsptHZ2kIVxHzmFmhzZXR-8Q3Hp2xO9MpB6F3Y,37772
crisscross/helper_functions/slurm_process_and_run.py,sha256=L8xczvdYKL_Gfvu5LV-5qZOb7i6j_ZY_yJeupNiz10E,1260
crisscross/helper_functions/simple_plate_visuals.py,sha256=OyT76gh8MmoX3kUV9lZAxrL27dv43th2EDQtDUjgZYo,6464
crisscross/helper_functions/standard_sequences.py,sha256=nGvpN-OSmiWYLtS-J6MZpjvzioWnPBTOs9VzaYV1Dms,1117
crisscross/helper_functions/__init__.py,sha256=RVos_fs_rpM955ok02i4X3MRNIrZzB6HvQkjxQcI-bk,6164
crisscross/slat_handle_match_evolver/tubular_slat_match_compute.py,sha256=T4xEPyB6DnzBPhtPKd-wrsmQTmOC7ujhVy1JQvpt9fs,27590
crisscross/slat_handle_match_evolver/handle_evolve_with_optuna.py,sha256=R2QOc2H4xwADRLH2hfShYXi26JcKvi9I7fnJsboO8us,2779
crisscross/slat_handle_match_evolver/random_hamming_optimizer.py,sha256=tFBXRCGRPFOH_DTyFyCERLHoZ1mwzbx-56qabuf8WU8,3266
crisscross/slat_handle_match_evolver/__init__.py,sha256=BUIngj_TijX-Il-2o5OG_Mx5OnS8V2uodNvb_R4KeyA,7097
crisscross/slat_handle_match_evolver/handle_evolution.py,sha256=Rb50AjVCWVV9-eMRYaCLOVJb0hZfhJMWvkSZg2T8mhs,28755
crisscross/slat_handle_match_evolver/handle_mutation.py,sha256=ehRQDA2SRFr1ERCAIsWquiJAtECHJJ0bPEQlUQ_wo48,12936
crisscross/slat_handle_match_evolver/katzi_genetic_algorithm_prototyping/hamming_functions_multiprocessing.py,sha256=Af0ugjnMhdPK387NfhCV2kTfVzSVMfN_gr3UCrWGiZE,31004
crisscross/slat_handle_match_evolver/katzi_genetic_algorithm_prototyping/Katzi_Hamming.py,sha256=UPQQ7Ma0HbtT-opEtJd_LxI5p8_wSyZTWhfIl7Z0dOE,26054
crisscross/slat_handle_match_evolver/torch_dqn_prototyping/dqn_eval.py,sha256=VCdPfYR2JxLV2f_WWQWD_57N6udyDgi33N-HL_tEu9g,3547
crisscross/slat_handle_match_evolver/torch_dqn_prototyping/neural_optimization.py,sha256=IOHcSOTskTES2lztr0zylcAIqQSIQc5WtLYEKnNQdVE,15368
crisscross/slat_handle_match_evolver/torch_dqn_prototyping/handle_array_dataloader.py,sha256=yYgtKTAlWa5VV389rDRjdPi28dwxbspL7lnoN26oeCU,1722
crisscross/slat_handle_match_evolver/torch_dqn_prototyping/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
crisscross/slat_handle_match_evolver/torch_dqn_prototyping/dqn_optimization_v2.py,sha256=SFqI4c5CoCFZInj2_ZxZUQIYo4SYm-Q73i82dVyQtEo,13976
crisscross/slat_handle_match_evolver/torch_dqn_prototyping/scikit_tests.py,sha256=yv5UeqYP303mftgOqgkd_TbNWFJOAQIjY42zuZuACNQ,2537
crisscross/slat_handle_match_evolver/torch_dqn_prototyping/dqn_optimization.py,sha256=SyBYW1YdQ325JdKBjNeSk06je9npS4jrZFIdE7ZYyVo,12861
crisscross/slat_handle_match_evolver/torch_dqn_prototyping/torch_hamming_compute.py,sha256=D11DAkn5U4b2hYG4q9fZLAbJYY9OtZgS2smbSOdqVfU,6167
crisscross/scripts/plate_handling/regenerate_handle_array_from_echo_commands.py,sha256=ysachOSWIxTsJIwdbXptOAfusXSguYUd4KzjSKruI5s,3623
crisscross/scripts/plate_handling/convert_idt_email_plate_into_2d_format.py,sha256=eu8OEskv-8exRYKGK1na3TjcY9yXmqHkLvFoVnmF-KA,1775
crisscross/scripts/plate_handling/testing_triple_layer_designs.py,sha256=PnFp1IaI5XSD-XtNhs9x_ScMKGVp_g9kvm461cGxRT0,1965
crisscross/scripts/plate_handling/sw_src007_plate_generation.py,sha256=vUGdcnWl6ANccozoqRi_v9csyDWIhay3A7HhRzWodFo,3083
crisscross/scripts/plate_handling/creating_combined_p8064_seed_plate.py,sha256=z3TZ9Ybt1G6whBGN8WFnGxezfcD735j0zGGF33zs00A,3807
crisscross/scripts/plate_handling/create_double_barrel_seed_handles.py,sha256=wvJ04OfLUKGOVTxFSbuRe24B5aJPTq9392E_LD-XgQY,2290
crisscross/scripts/plate_handling/attach_handles_to_slats.py,sha256=i6ug6dNqwxN87Q2W_ne_qWOEvMnlDGDaBXgEiML20hI,1627
crisscross/scripts/plate_handling/src_007_refill_script.py,sha256=w3JpWmwKXcnMPdDQcQrhmvtPNYAr2yn1hio5XpbFL6Q,1337
crisscross/scripts/plate_handling/update_old_seed_to_hashcad_seed.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
crisscross/scripts/plate_handling/generate_dna_paint_plate.py,sha256=GX-Q930xjhAbI1qIhGgMCkcjpDrrLWLJ4YmQOEEnNaE,863
crisscross/scripts/plate_handling/convert_src002_into_src009.py,sha256=ru-GtOnn5nPcXDwJ35DNM_bG37whXYepHFGP0qdziyQ,2793
crisscross/scripts/plate_handling/creating_new_assembly_handle_plates.py,sha256=cx-nR6P50DHB_WjYbI0fmURRYJ3oe78DHQbOjzYuYB0,3300
crisscross/scripts/plate_handling/gnp_concentration_tester_designs.py,sha256=sQFGmZv-PvfUczKr-CRjFMaEtIO95prRLkDB2fDGJ6A,7587
crisscross/scripts/plate_handling/testing_crisscross_animation.py,sha256=2ez8LkuQF7DzoJVDE5TzpbKIp0q4EQxTrB20JMWt0lU,5130
crisscross/scripts/plate_handling/combining_seeds_into_one_plate.py,sha256=xoWrCJrfEKxyMnILxyXHoJQC-vMJsiIJacXQtkaAiNQ,3205
crisscross/scripts/plate_handling/prepare_plate_for_resuspension_with_liquid_handler.py,sha256=n2MWifWACMGQP325l9aqRl_9uhB5JuizrSZUxFWAxvo,4954
crisscross/scripts/plate_handling/repopulate_plate_details_from_idt_order.py,sha256=WwItCIPohNesD_CJcPj9oLzH16oT-Hrb2AjRHtk15Kk,870
crisscross/scripts/plate_handling/plate_resuspension_scripts/general_2_vol_plate_resuspension.py,sha256=shruX1hZCldt8Fx6pyLvv7rtE1Y5MSrGBiew_b47UJM,2118
crisscross/scripts/plate_handling/plate_resuspension_scripts/2_vol_plate_resuspension_assembly_handles_nov_2025.py,sha256=0p0Mw1cbBVQfPqiEn2uM2lR4Tbqu4nuiVSnDrdcf6vg,11691
crisscross/scripts/plate_handling/plate_resuspension_scripts/prepare_plate_for_biodot_resuspension.py,sha256=t3M0G2KlOLcF_CIsSffEofRyTwB2qd3U3UFr6gW1GTI,1835
crisscross/scripts/plate_handling/new_handle_library_generation/new_handle_library_quick_checks.py,sha256=LniW67WnpJXhRZGRuT1EFN_IejnUoKH_Z1p-C7YyeIw,2620
crisscross/scripts/plate_handling/new_handle_library_generation/handle_library_resuspension.py,sha256=M6xax-NUDgn-cuJ2P79DhY3au9UgJeWOyavyGZUEWOE,5981
crisscross/scripts/plate_handling/new_handle_library_generation/hist_check.png,sha256=tRbrjpa3OLw2FoARJBQ51F7EJHR2jg8s7VG0DZCEg4Q,46141
crisscross/scripts/plate_handling/new_handle_library_generation/new_handle_library_plateify.py,sha256=6FEHIM3K5j55tNkQO1gqqsRiFHB_283WkRrzIQ-_hrs,6827
crisscross/scripts/plate_handling/new_handle_library_generation/create_working_stocks_from_master_stocks.py,sha256=YO3XPk4Ap3gXRud0YjFs7d3OU70_DWNdkA_gJNZQny0,1451
crisscross/scripts/plate_handling/new_handle_library_generation/TT_no_crosscheck96to104_64_sequence_pairs_flipped.txt,sha256=zkdyeg2UWROVEDy8gUWf0XqxS6SHXZEwVqwF9xh7yiM,1024
crisscross/scripts/plate_handling/new_handle_library_generation/analyze_idt_plate_cost.py,sha256=rpjz4JLpYKu1g-wSaid8-O8I4BAFvaV-zXFAdTfEuwU,2044
crisscross/scripts/plate_handling/new_handle_library_generation/matthew_handle_energy_prototyping/seq_sampler.py,sha256=sE2VFUHuV7ArsfFdzWOCzhEwR1y_8fhnb9debH59mog,1380
crisscross/scripts/plate_handling/new_handle_library_generation/matthew_handle_energy_prototyping/core_32_sequences.pkl,sha256=Kv0ks3S9qCoEqATfJUCoavkQX1t-uuD36e6fW7T9sVA,664
crisscross/scripts/plate_handling/new_handle_library_generation/matthew_handle_energy_prototyping/nupack_testing.py,sha256=bF8nyY_liDTutj4nuMK8A9Bv-DOGA5v9RFl-KmWWWgA,2081
crisscross/scripts/plate_handling/new_handle_library_generation/matthew_handle_energy_prototyping/distribution_generation.py,sha256=gzi7MzMmGeO-7tC_wca-XNKE5R5QJIQZ13vl-MdvXt8,1435
crisscross/scripts/plate_handling/new_handle_library_generation/matthew_handle_energy_prototyping/gc_3_4_full_sweep_energies.pkl,sha256=DpMnkrEDDojslU-D6sE-fLuqKsUiNx7qKkLIPbAs2hg,170312
crisscross/scripts/plate_handling/new_handle_library_generation/matthew_handle_energy_prototyping/chris_handle_distribution.pkl,sha256=dJYngPrgHmRgBv2zIDyaZa8ThUIn4nK1rjEIhi_GRzo,5190
crisscross/scripts/plate_handling/new_handle_library_generation/matthew_handle_energy_prototyping/handle_antihandle_binding_energies.pkl,sha256=FCCEIzQ5N_qgnoNWo3G_HuTfluF_n5NPkci4MyAwcMM,24801
crisscross/scripts/plate_handling/new_handle_library_generation/matthew_handle_energy_prototyping/256_set.txt,sha256=QV7MpQ-klX-qAH14exnjzDCND_p_NlPgsIbK7yPxSVA,2047
crisscross/scripts/plate_handling/new_handle_library_generation/matthew_handle_energy_prototyping/handlenotebook_katzi.ipynb,sha256=R6pwjfEw_GN1fvfhr5iQSy8IqHOGLg_Uts-ULeUgYVw,331403
crisscross/scripts/plate_handling/new_handle_library_generation/matthew_handle_energy_prototyping/test_2.py,sha256=v7mnm5HBgoroKgUm6yO0fVrWhNYb1C_k2Ra0CoeTK7A,4020
crisscross/scripts/plate_handling/new_handle_library_generation/matthew_handle_energy_prototyping/generate_all_binding_energies.py,sha256=VMEujH9Coq2_tCPdrlxeqfto1KqiIE_jPlmXk11FkzE,1273
crisscross/scripts/megastructure_designs/sierpinski/echo_generation.py,sha256=pChnkbenIXdPYQ8w0FfSk4TLOvQNs6e1j_07D2mslvA,6344
crisscross/scripts/megastructure_designs/bionwire_collab/quick_evolve.py,sha256=yK5c-7E49kTY8Simfc5u-D_FAcRJpzBkeWVHhZjjIZE,1683
crisscross/scripts/megastructure_designs/bionwire_collab/design_v2_wider_trench.py,sha256=tM_wBJ-EMCeHx_oUlO6Dy1SqvOGbs8BlNduTL55OPs4,10006
crisscross/scripts/megastructure_designs/bionwire_collab/design_v3_rect.py,sha256=LnBlV7ztZhWq5dmVYGBmZez0-OPzy_n9rEXvep8OggU,3218
crisscross/scripts/megastructure_designs/bionwire_collab/design_v1_visualization.py,sha256=oUrnbubuhjE7_mJyzSIv456wZj3niPSV2bSTW9-at0g,3842
crisscross/scripts/megastructure_designs/bionwire_collab/unfinished_designs/deep_trench.py,sha256=PSIe-yzrkAXZBpGY3C7Wa2UT2eS07_yF7xuBnw52w58,820
crisscross/scripts/megastructure_designs/bionwire_collab/unfinished_designs/crossbar_example.py,sha256=foTnYEja72VtjV0AzDtvo6JXc05-nifH5Iv2YBnX4-o,1315
crisscross/scripts/megastructure_designs/hash_cad_paper_designs/ribbon_evo.py,sha256=HUvuuc4uDqbX7y_rg1sppb6y1VtCNYP-IiFFsqLwg54,5895
crisscross/scripts/megastructure_designs/hash_cad_paper_designs/design_prep_and_echo.py,sha256=q66unQut7ADBbkSPJHPWIkgOUszwbCKgXPHztdJAQLo,6237
crisscross/scripts/megastructure_designs/hash_cad_paper_designs/cost_calculations.py,sha256=jQTCIyYrNQq59ftjOKl5JtgGE0bnW1OZ_IR3ua7gA_I,2370
crisscross/scripts/megastructure_designs/hash_cad_paper_designs/physics_score_exploration.py,sha256=uAMlFyfp6fdezdmhXR3UnkIQb_wy2P-9Lfiv23kSBPM,10805
crisscross/scripts/megastructure_designs/hash_cad_paper_designs/echo_combining_script.py,sha256=AY2o-YAoahwBL4mmNAwnHD1DToUCIZx219yS-sg3MZ8,774
crisscross/scripts/megastructure_designs/hash_cad_paper_designs/experiment_1_quick_check_hammings.py,sha256=pUb8AuZueCQos2UpMRJqQx2fPSMx7fi33sX5LNVKF6Y,828
crisscross/scripts/megastructure_designs/hash_cad_paper_designs/ribbon_design_prep_and_echo.py,sha256=RrUFIDDw34fEvtfI_xhT6-cVBKelxhad99q4tYpdJAo,4965
crisscross/scripts/megastructure_designs/hash_cad_paper_designs/experiment_2_sunflower_design_prep_and_echo.py,sha256=m0b8U1REo2Y9833IZU2Ggwt9IhWMULuHZwDRcFcKnQU,5263
crisscross/scripts/megastructure_designs/hash_cad_paper_designs/experiment_2_sunflower_quick_check_hammings.py,sha256=DY7-T2tD0Upeqqc6V6ST5V3mBeIpwSzgTpHpGsJYs_o,994
crisscross/scripts/megastructure_designs/hash_cad_paper_designs/design_evolution.py,sha256=bghNst4QprxuFD0frZaEk-Dd1nYMDE-oxylQlahxOXI,2854
crisscross/scripts/megastructure_designs/optical_computing_collab/new_square_w_double purification.py,sha256=FKN4QF-hUl4GZwsYzT8ISb_BY_imDDbcoYrz835EUl0,4648
crisscross/scripts/megastructure_designs/optical_computing_collab/quick_regen_jan_2026.py,sha256=ScO5XphdsT5BKFA_bFzfOVw3E0-9QRWfXUbGHbfOTmg,3210
crisscross/scripts/megastructure_designs/optical_computing_collab/preparing_more_y_slats_with_h29.py,sha256=7e2g5vsrq9bSIqG3pApqMnmQQ-p_w-MQG8coBX06a_g,9018
crisscross/scripts/megastructure_designs/optical_computing_collab/nelson_quimby_mats_refill_sep_2025.py,sha256=LmtjCxWQ_N3w5CnEfsZbgvTsTkvPRY8l27Y8Y5b1il0,3532
crisscross/scripts/megastructure_designs/optical_computing_collab/new_designs_june_2025.py,sha256=i6K-8YvpZgeJZVoCH_VysN1yCYm4mUCBwhpbA0mI5-4,5565
crisscross/scripts/megastructure_designs/optical_computing_collab/square_design_for_optical_computers.py,sha256=6YXyhpL6QqIzZKrWSon7rds9bEZd8QrWZFazemOjPA0,14577
crisscross/scripts/megastructure_designs/optical_computing_collab/standard_design_with_2_step_purification.py,sha256=dPjW-CjEe8f624YLbKRljl0EOcCHLIlcg6yAZ1xITpI,5746
crisscross/scripts/megastructure_designs/optical_computing_collab/designs_nov_2025.py,sha256=G_10duy3ff_hAahx1Of9VDlmgnupDgv3ooo_O44Zmbk,11200
crisscross/scripts/megastructure_designs/optical_computing_collab/testing_octa_pattern.py,sha256=pMx58SMcGcMjbQBvt2KDOpbmb-tIWbrWWEFV4JdOTts,1910
crisscross/scripts/megastructure_designs/optical_computing_collab/calculating_crossbar_placement.py,sha256=Itv46E715OWvCZrt3Ni6cjXt7dCBfV6keSliOlOnUug,3525
crisscross/scripts/megastructure_designs/optical_computing_collab/generating_crossbar_handle_pattern.py,sha256=jzY42o59NzGhmN7w4fgrE33oks_ngETmmo0qvRq7yyA,2605
crisscross/scripts/megastructure_designs/antigen_presenting_cells/CAPC_v1.py,sha256=riepGHwpQHDEL7WVucsQdEcukH4HyX_SGL072ORWUZU,6734
crisscross/scripts/megastructure_designs/antigen_presenting_cells/capc_pattern_generator.py,sha256=yoiJfJ6HVU3p3xFdPWXN2DUTDlYPER4dP4LKTw12yRk,5013
crisscross/scripts/megastructure_designs/antigen_presenting_cells/CAPC_v2_hexagon.py,sha256=GxcajbaLVIIxCO7NN5pmuQ-QKg_TaYv4fh4o6mgfHcQ,9022
crisscross/scripts/megastructure_designs/antigen_presenting_cells/handle_evolution.py,sha256=qZcnhIMsIBogFik-ibMzkgWqhE0Z4J6rtFk-u0QHrmM,2205
crisscross/scripts/megastructure_designs/antigen_presenting_cells/preliminary_work/CAPC_v1.py,sha256=6Nv-B6PXV5URBr-_0ZbMX2umiZ_aWmq5Lg-Ln78rVLk,8053
crisscross/scripts/megastructure_designs/antigen_presenting_cells/preliminary_work/H5_bart_edna_handle_library_generation.py,sha256=I-TwRaRdx5DHz0V3ZwA7_x46VjVNkFpBfMqNEd7TyKw,1878
crisscross/scripts/megastructure_designs/antigen_presenting_cells/preliminary_work/design_display.py,sha256=NnzED4lmTAxj4fkq3XjCNS-GYT7T0_-tQ9p0jAP2kQk,3640
crisscross/scripts/megastructure_designs/antigen_presenting_cells/preliminary_work/creating_designs_for_fellowships.py,sha256=3aI6V7E8QrxKNNDRpr5cI5HPcDFOqroprLlqKnfU4aw,4690
crisscross/scripts/megastructure_designs/antigen_presenting_cells/preliminary_work/K99_designs_v2.py,sha256=0z4w_uqPALdCfqPYD52_f0KFKQ82QO9kTMrO91lXJa0,4671
crisscross/scripts/megastructure_designs/miscellaneous/quick_2d_ribbon_test.py,sha256=fVDJNLfIgKt9_wnjWv6_bYOfE9oihOsUeUWNR5Fyusk,5139
crisscross/scripts/megastructure_designs/miscellaneous/quick_sierpinski_patch.py,sha256=7fygNntqG1lltaJ7Rps7de5r-KbH_ATbPSb-M2lSs0I,2592
crisscross/scripts/megastructure_designs/miscellaneous/echo_check.py,sha256=cE1mP8CeDe7HXUltdsUJMhjKAlo-qAmSRo2lQvaz2cs,1845
crisscross/scripts/megastructure_designs/early_megastructure_designs/glass conjugation/design2.py,sha256=hKlpz1CQdFAW9ymoiFK6JTHH0LEg2IxZDUFaQxmL29c,5337
crisscross/scripts/megastructure_designs/early_megastructure_designs/glass conjugation/design1.py,sha256=CRGjeOS6766H14qtDLBxFRhEud63YCZVqu-gl_Hia6k,2172
crisscross/scripts/megastructure_designs/early_megastructure_designs/TMSD/basic_designs_v4_extended_trench.py,sha256=Vo4307Ey7dZhPmqkMrLnyhQIQDKxg3XZAdFQU3IOrE4,14007
crisscross/scripts/megastructure_designs/early_megastructure_designs/TMSD/basic_designs_v5_mixed_gnps_nelson.py,sha256=xvjUBvIcJ-H4duGOqSweZPd25iWPDMPTX5v4IvFFEX4,15168
crisscross/scripts/megastructure_designs/early_megastructure_designs/TMSD/basic_designs.py,sha256=S9TNzLyO6wciDKsyh2VfD0aD6ECaH15BEDRWdnKXX9U,11971
crisscross/scripts/megastructure_designs/early_megastructure_designs/TMSD/basic_designs_v3_no_knock_in.py,sha256=2PJ5o2uIfeCYCfXyDKGsnAvU05He5AbS7oAhTh9aQTk,11330
crisscross/scripts/megastructure_designs/early_megastructure_designs/TMSD/basic_designs_v2_incomplete.py,sha256=_HXN140k3ZZLRjr2CDERjUEY9-gWsD_7TU-74krNM2I,12611
crisscross/scripts/megastructure_designs/early_megastructure_designs/TMSD/basic_designs_v6_multiple_reactions.py,sha256=nKbHl4KtgyTd8cPqjY_tojAlgB5-xMP_rs8UDVAMUis,9196
crisscross/scripts/megastructure_designs/early_megastructure_designs/TMSD/split_design.py,sha256=STM6Y4pV9cr25bG7glpzREx3_UVYk_5TgbXO4kbKL3w,6457
crisscross/scripts/megastructure_designs/early_megastructure_designs/3D_stacking/version_2_march_2025/echo_combining_script.py,sha256=sqyse2ifRPhssucYwjotgWJ8mNDOEsqy0YLFUsYt6SA,1092
crisscross/scripts/megastructure_designs/early_megastructure_designs/3D_stacking/version_2_march_2025/evolution_version_2.py,sha256=N9BXU4OYpLQC58zY2NHQhF3A8ssx8Qx6MoaSK6h6FoY,2638
crisscross/scripts/megastructure_designs/early_megastructure_designs/3D_stacking/version_2_march_2025/design_setup_and_echo_export.py,sha256=q8Bdtcki_WHSqr5UGem5VU9fJe5RifWDVE4hIXZXukQ,6120
crisscross/scripts/megastructure_designs/early_megastructure_designs/3D_stacking/version_1_2024/design_setup_and_visualisation.py,sha256=v_ufzVHkBG_Ma1Jx3rGVak9pOjuTv1A0SRZ2F5K3P_g,2496
crisscross/scripts/megastructure_designs/early_megastructure_designs/3D_stacking/version_1_2024/3D_stairs_handle_evolution.py,sha256=TN_Znvv2QmNY_pe3CCCxJkrP6CpTtqCgm0OuW3acUZI,2207
crisscross/scripts/megastructure_designs/early_megastructure_designs/3D_stacking/version_1_2024/7_layer_viz.py,sha256=vjaD5tXHQwuHJ3KGk2tJxhniLa-aLu30RLQCpF7ZktM,1500
crisscross/scripts/megastructure_designs/early_megastructure_designs/3D_stacking/version_3_april_2025/evolution.py,sha256=Ckh7raPLKgvq3fgL3OvT2UAG0ivI4_ra2o5EpiluPd4,2676
crisscross/scripts/megastructure_designs/early_megastructure_designs/gliders/glider_megastructure_creation.py,sha256=0AFFWQOncPgtucKzMm0bk4fQ_3K-WJaSV5dVGQ1n9GU,5457
crisscross/scripts/megastructure_designs/early_megastructure_designs/gliders/glider_v2_design_and_assembly.py,sha256=wfuAY9cld9XVlnErmlKGWgp4_xCzG0ra-lxc2ZFFe94,11706
crisscross/scripts/megastructure_designs/early_megastructure_designs/gliders/glider_design.py,sha256=jGxNqU0Ep6h4mRxtZkM2iiScQ6eZvGnJGeSzgwi7_1M,5912
crisscross/scripts/megastructure_designs/early_megastructure_designs/magnonics/basic_squares.py,sha256=YErc8nJ124rmD_5GT90H9ZYFjV1thNiBMLJiFAFdc10,8457
crisscross/scripts/megastructure_designs/early_megastructure_designs/magnonics/basic_squares_with_new_library.py,sha256=FidqqosKZUBwkssO6irN-oGPV_o_DmQfKRgb6qzxa1g,10070
crisscross/scripts/megastructure_designs/early_megastructure_designs/two_point_bead_purification/design_iteration_1.py,sha256=A7F0RIGRBB06FS7P3OJy3YEfO6_6ky4qyc8bZqM2Dps,6017
crisscross/scripts/megastructure_designs/early_megastructure_designs/two_point_bead_purification/design_iteration_2.py,sha256=taL76t4xr3nJ-XoQNz8lxTs47SBKgjD0nahcdX1Owak,5482
crisscross/scripts/megastructure_designs/early_megastructure_designs/two_point_bead_purification/plate_generation.py,sha256=cIGpxq0Xd0yo06WqjjnwqrDTKmXBjDXT4LZ7UGT3-ek,5634
crisscross/scripts/megastructure_designs/double_barrels/db_zigzag_ribbon.py,sha256=g64KI3-b1z8uKO_oetIhFeCe_whdRWI0Ol__FahTFZY,3767
crisscross/scripts/megastructure_designs/double_barrels/cis_trans_echo.py,sha256=soYpQg3MpiHOsEHqNWVJkfPRdb64Flxz0_VWUxjw25s,12043
crisscross/scripts/megastructure_designs/double_barrels/db_ribbon_echo.py,sha256=WHPVCjE8Fxm-XFckGhIkZCSgIWjP5M-sODyBOw_1mXg,7649
crisscross/scripts/megastructure_designs/double_barrels/db_seeded_zigzag_ribbon_echo.py,sha256=aOyROfqcYKEK9jQ7ixGZOsikQ42CmcLaccUMjZRbrZc,6802
crisscross/scripts/megastructure_designs/double_barrels/db_heart.py,sha256=f0EwrA3_WEYaexySBhq9er2Xg4_Y0hDe7oO2KCOEiZY,5487
crisscross/scripts/megastructure_designs/double_barrels/quick_evolve.py,sha256=ULVKyQBduEqoMRFKXrs6dfRk-BOjTFrWiwEk9oVCB2s,1802
crisscross/scripts/megastructure_designs/double_barrels/setting_up_cis_trans_experiment.py,sha256=oDPpSJk8ejb8NpBAWxyrDnStLGyC3TPE3L568hN9enE,12669
crisscross/scripts/megastructure_designs/double_barrels/db_seeded_zigzag_ribbon_echo_try_2.py,sha256=XWj6nKetDIi9wNTXSweBYuajq_mIR5AqRAIy4P-o3kA,6798
crisscross/scripts/megastructure_designs/double_barrels/evolving_db_ribbon.py,sha256=dKOkqL_-ydWq5r6WCe0Zi9Rpcpnq1aO3koobtCb_9hM,8261
crisscross/scripts/megastructure_designs/3d_folding_cube/CB015_echo_prep.py,sha256=pBGvc5JejDSxF4ZSCYQBQfMsVgmUn-txF6qi2Yscswc,3824
crisscross/scripts/megastructure_designs/3d_folding_cube/CB015_handle_evolution.py,sha256=Iw-OYMl4pRWfXLFl5IcV_2HKGSsVZtwCX3aimfv4suU,2077
crisscross/scripts/megastructure_designs/3d_folding_cube/CB019_TeenyDie_EchoPrep.py,sha256=VU9fE9cXWao3fk1MawR75tkw5YBF_XofBLgMmiC1ILo,4553
crisscross/scripts/handle_evolution/batch_file_generation_round_1.py,sha256=FALYZfI91x2mY8380zweb5YfMOfFLTVnJwMTxVSww-k,2704
crisscross/scripts/handle_evolution/optuna_viz.py,sha256=bdpkTJec7D3QpdkSckBbIpimZXzJWxdm_EwZGhqfkA0,710
crisscross/scripts/handle_evolution/optimization_with_optuna.py,sha256=QoA_HXVJXhLw0Kl3RsiKCAKLiNHezZcGGuuUYgpjvCw,3401
crisscross/scripts/handle_evolution/hyperparam_sweep_1.py,sha256=VeKVpKZWrMBI3_SnP9Mq11mox-fLVngaNKKDJrJeApM,6379
crisscross/scripts/handle_evolution/optuna_sweep_quick_graph.py,sha256=d6InI6cnI4WHl_2cNvf5u9xMnbRLeMhVmtE5629vVAo,623
crisscross/scripts/handle_evolution/debugging_multi_split_evolution.py,sha256=Qgup6CDnlcle7gWNZENXAGQmMhjn-vCG7iQUFkUnp3Q,2205
crisscross/scripts/handle_evolution/multi_run_quick_comparison.py,sha256=gAZjeBE4-gxpeYOhpmEyqRwp_C8-SBDWm_V5VJQ7zyo,2464
crisscross/scripts/handle_evolution/debugging_evolution.py,sha256=oig3uc2laNe7Hv8TYvoKbhaj5CijVb4l8BR_dZdW9bE,1770
crisscross/scripts/handle_evolution/library_sweep_optuna_optimized.py,sha256=9WTPUv3LPrMRu3Sa1mX0SMXbU3Xz63tI6X44irbAgUw,2742
crisscross/scripts/handle_evolution/heatmap_experiment_analysis.py,sha256=7aAtMCJW9Yihx6zEkBjSgECNn2ShbjHnsjjw7uMidsk,2079
crisscross/scripts/handle_evolution/64_seq_square_test.py,sha256=oRE7mfFT-3GjZjIDn8-aHdUAdxZEsXdhL0Aecb2Xmr4,3303
crisscross/scripts/handle_evolution/unfinished_scripts/hyperparam_sweep_2.py,sha256=QfUR1hy0vwJ63iwBNrOjEo5Tko47R9W9VCLxWRKiRUs,2965
crisscross/scripts/handle_evolution/unfinished_scripts/results_interpretation.py,sha256=0oiSp-EddiGyNswAuJkPL0m9oB2HgJBV4ZaXBijIFas,2434
crisscross/scripts/handle_evolution/unfinished_scripts/results_interp_2d.py,sha256=SI3LpdJEFpC7mkNfwvBn86QTSC_zkDdK6C4ybZhha5U,1623
crisscross/scripts/stella/SW101_handleaggregation/ handleaggregation_echoprotocol.py,sha256=90JOq963vHRbq7TsB0piTYU2tlqLLwtoWChgTvOAyMA,4141
crisscross/scripts/stella/SW102_finiteassembly_repeatingunits/SW102_echoprotocol.py,sha256=DR6_OWu71SgKg0h7kzwMMHXsKu2HN8TGFTBZ8F5d_4c,5165
crisscross/scripts/stella/SW102_finiteassembly_repeatingunits/SW102_handleselection.py,sha256=9I78Za_YimIHEFJpOLEpZVNHZ1lBJfhTrywwXsq-PnA,3032
crisscross/scripts/stella/SW102_finiteassembly_repeatingunits/combine_magnonics_and_repeating_unit.py,sha256=0mFxhOamlc-9nL_lrSPvPAJGzpLtT7Y3iXQAnB-W6VU,1607
crisscross/scripts/stella/SW127_UFribourg_Design3_8xCNT_4handletypes/SW127_echoprotocol.py,sha256=l7rMbut0NRzlqnK-szCFJ0dTXc0pyWFwO5Kih1riwa0,2417
crisscross/scripts/stella/SW128_UFribourg_Design1_aggregationtest/SW128_echoprotocol_design1.py,sha256=LnXFvKxyFwijW7F8Dc0yEI_Bf9MqTgtbx1y-0Yk6k8w,4430
crisscross/scripts/stella/SW143_SW146_SW149/SW143_SW146_SW149_generate_echo.py,sha256=zQ45uMeoIuDi39mJJfelDoCqpC-zdJouDFwrBhVbRIM,9356
crisscross/scripts/stella/SM02_battleships_with_cargo/SM02_battleships_with_cargo.py,sha256=IajQGt42SKK79WSBFKRhaE2UntLZP17kxT8T7fseDC0,3113
crisscross/scripts/stella/SW139_BioNWire_Aarhus_DTU/aarhus-square_dtu-rectangle.py,sha256=VMlMKSb9fqoEht1_whnHMYXlFOT_ic4kWLXOnPFbD1M,5373
crisscross/scripts/stella/SW131_bionwire_square_trenches/SW131_echoprotocol_separatetrenchslats.py,sha256=Miqeqm0IEhUNdSR6Ihv7w5Fh7nnPodoT-yYNe4SvgBs,2723
crisscross/scripts/stella/SW129_hexstar/design_setup.py,sha256=Uk2NFZyGsv3KnLWKn2ob9L4oRdcwg6z1bfMyX0RuC0Q,4125
crisscross/scripts/stella/SW129_hexstar/handle_evolution_server_prep.py,sha256=OLtqyFmnaObNZ1byHfhzmL5It7Gi1ugpsBQQLQvdIiQ,2687
crisscross/scripts/stella/battleships/design_prep_and_echo.py,sha256=O-J-uvovUy27W12FmDBXVMGMmFYxK54Cx7XkzQLJuIQ,3610
crisscross/scripts/stella/battleships/server_evolve_generator.py,sha256=aCuclaPz8zGIls4LNS3N0UyiMVovcM5SOCa2CDLWGns,2812
crisscross/scripts/stella/design_debugging/gliders_stellatest/glider_megastructure_creation_stellatest.py,sha256=o6cPZLN_ntj1vFypjZqOYxpOH3zeAVf0kJl6odAiha4,8537
crisscross/scripts/stella/SM01_hexagon_battleship_v1/square_example_script.py,sha256=7lOO8BcVP6IKWIu9715E11GGKZTrWSMPML4j9zPN5yM,2331
crisscross/scripts/stella/SM01_hexagon_battleship_v1/test.txt,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
crisscross/scripts/stella/SW144_startertestplus/SW144_startertest_plussign_echo.py,sha256=WQ6bRQVByfsaRgdj9U7fOkEiHOPHJGVRSTH0x-2B5z8,3327
crisscross/scripts/stella/SW110_UFribourg_Design1-4xCNT_Design2/SW110_combine_echoprotocols.py,sha256=uV4Y0hu2Hqch4TLhpcNY1p-gYsOvfku6o93ylXuAeAQ,1086
crisscross/scripts/stella/SW110_UFribourg_Design1-4xCNT_Design2/SW110_echoprotocol.py,sha256=r9rN2HaGUVr5JKYwTCVsXJisIkaU8ABWHpKuXpij5RI,4924
crisscross/scripts/stella/SW113_psoralen3primeTT/SW113_echoprotocol.py,sha256=APK6NnAoWxIMwRxBDpPmiuT-KIn-7jcx-dujm_QJ6rA,2721
crisscross/scripts/stella/SW121_spuriousassembly/h29_handlearray.xlsx,sha256=bepbATtF3euatWk4_K0ixqPz-ZcoVOmUMC8f-5gKcnw,8813
crisscross/scripts/stella/SW121_spuriousassembly/SW121_newlib_spuriousassembly.py,sha256=LNq6owzJ3QALr67QN2pGnkKJhRIkoItno0KG4frCAx8,4826
crisscross/scripts/stella/SW119_newlibkinetics/SW119_echoprotocol.py,sha256=M-sA1HNxO2VblJzZoOTgKjIGW0T61aRSdOsNzaPTX6U,8628
crisscross/scripts/stella/SW111_largefiniteassembly_repeatingunits/true_mighty_29_square.npy,sha256=wJKh9n9cGGyGH5irgS9JdOSYotVb37T4VEWRsKcWUOM,4224
crisscross/scripts/stella/SW111_largefiniteassembly_repeatingunits/SW111_echoprotocol copy.py,sha256=Y5g3EoBmcUAhi076wb0dBtG-KLOCidBJrVthwck3xU4,10887
crisscross/scripts/stella/SW111_largefiniteassembly_repeatingunits/h29_handlearray.xlsx,sha256=bepbATtF3euatWk4_K0ixqPz-ZcoVOmUMC8f-5gKcnw,8813
crisscross/scripts/stella/SW111_largefiniteassembly_repeatingunits/20241030_testpartialareahamming.py,sha256=o_aiFfBtnPkxbxr0UPV-AeJAu0Z8ULjnkN8wb4nZPx8,7456
crisscross/scripts/stella/SW111_largefiniteassembly_repeatingunits/SW111_combine_echoprotocols.py,sha256=f-c1p9OwsbEqWGCZjgsRcYtPAfuPtkb6HNloz4pI9xE,1078
crisscross/scripts/stella/SW111_largefiniteassembly_repeatingunits/SW111_echoprotocol.py,sha256=YK9F7bDAdZcwKnu3ddyumt4n091W-tBUEWrfzBRxNFI,10858
crisscross/scripts/stella/SW099_kineticsweep_script/kineticsweep_slathandleselection.py,sha256=19z2NuZRf_azXzAWlD-Mx75bZhbaX_EYlPgRDriWBWM,4101
crisscross/scripts/stella/SW126_bionwire_wide_trench/20250324_square-handle-test_echoprotocol.py,sha256=WdqldbNamv-Bs-IjVG90qq9z0aEw16ZR22O2VNeq0iM,2692
crisscross/scripts/stella/SW145_bionwire_aarhus10nts_square/SW145_remake10nts_square.py,sha256=bDC4Otdd6a6qen6FMLgV-wPTY5Jsx46Mq6sEBStfSzg,3326
crisscross/scripts/stella/SW132_repeatingunitassembly_epmotion_smallscale/SW132_echoprotocol_script.py,sha256=YrZrK4cPL_c6n1IqWVTg4ddxd5uiQKNOPeX_cjhHNmg,3420
crisscross/scripts/stella/SW105_psoralenslatduplex/psoralen6hbduplex_make_echo.py,sha256=guC1253KOzaL4563E1vRd8nB73K5jHcmQ6AiGfBAiT8,2284
crisscross/scripts/stella/SW114_psoralenunitsq/20241216_limitedhandlearraysquare_echoprotocol.py,sha256=6VGTTbGl8JlZtOAw3g6qiN9jhEyQr7bYaBDiIc3q3to,3974
crisscross/scripts/stella/SW135_minisnake_kinetics/minisnake_kinetics_tests.py,sha256=YcbfV6cD8rB6xeMokizhg1jLvLONz0kVWST3XZbIgSI,3460
crisscross/scripts/stella/SW135_minisnake_kinetics/test.py,sha256=DwF4y6yzUHcYyOUJgyYWU6e3Wqe0mCrbIYhfCEpSKE0,82
crisscross/scripts/stella/SW135_minisnake_kinetics/SW137_steps1-4kinetics.py,sha256=CZA6QB9Ap1aN5w4ODIyFF0qc-gmutw-sltifHPY4ySk,5105
crisscross/scripts/stella/SW134_seed_side_growth/SW134_seed_side_growth.py,sha256=uyib3ydDHpaz09KhLaAK5GpOb_P-dJpYK7FpHzcrZp4,3260
crisscross/scripts/scratch/read_idt_export_obfuscated.py,sha256=26Otwvp8NFemoBUG3kUf0E3nlkr-H4H5KKFdBRxavlA,660
crisscross/scripts/scratch/checking_sierpinski_evo.py,sha256=JTgaGMF2letD7sHldA2ZI7YIae_tausqUB-NNIQHRzM,2597
crisscross/scripts/katzi/analyse_echo_plate_usage/analyse_echo_survey.py,sha256=FH8RP5VZ-Au3jEllbbqugE_u5dztRC_d8hA2hVRwLrA,15483
crisscross/scripts/katzi/analyse_echo_plate_usage/test.py,sha256=sLmhOHeGU5XvJ_y7Nmif_BPxYAHjKY07u_b4IoxCeII,1378
crisscross/scripts/katzi/analyse_echo_plate_usage/analyse_echo_survey_2.py,sha256=qBl713flFPo800NfuyCwvVX1Vn5d7Xp_GLCjDhlkSj4,13235
crisscross/scripts/katzi/zeta_sizer/one_global_tau_fit.py,sha256=7R20zfIcvGJ-qIZXTgftqJGgZP5m3TrlLRxtg5x4W3g,8574
crisscross/scripts/katzi/zeta_sizer/prototype_fits/find_melt.py,sha256=3HPfLHRLQPNwx0DHgzj0qOUpdtC-51kqkI8mSWwwZI8,5896
crisscross/scripts/katzi/zeta_sizer/prototype_fits/melt_vs_valency_fit.py,sha256=-IOKicIA4zbAmOSy95mdHUIIMnPnc0_wYJo0jNYc5A0,9748
crisscross/scripts/katzi/zeta_sizer/prototype_fits/one_tau_fit_per_set.py,sha256=MZanMSW45z4VkMn_D4EgqmmPAqHEbZX9sqHL7HkpPA0,8624
crisscross/scripts/katzi/zeta_sizer/prototype_fits/combined_melt.py,sha256=54UXQ6NRa3P9tq_v51JYYeCGur6VhP57IywHYmtvtn8,5821
crisscross/scripts/katzi/zeta_sizer/prototype_fits/find_melt3.py,sha256=dqmvKlsE2EaSEZVWOsgkem1R8jigyecyoUeRou0Ff7Q,5626
crisscross/scripts/katzi/zeta_sizer/prototype_fits/find_melt2.py,sha256=fFblTmi1UjThDB708-nbvUtXki8XgyRZ-TWSTrokf_8,5073
crisscross/scripts/katzi/test_C_code_eqcorr2d/verify_results_eqcorr2d.py,sha256=kOtQFwoPeMlCTsstpw1E3gtTVHqPSuka03iiiCBsDxI,6592
crisscross/scripts/katzi/evolution_analysis/plot_things.py,sha256=nU-jidVqxRcjqNoP0QQ9gy4sdmCTTMEFQvsXLW5auNA,11694
crisscross/scripts/katzi/evolution_analysis/run_evo.py,sha256=5ay6LULt5XgTxogZQEaPY26CX1zzXpmFv9Q7skoHHVQ,3727
crisscross/scripts/katzi/evolution_analysis/plot_things2.py,sha256=m-4comElpFbWKsPblmv1Mi7ZPVOT86daYTAP8rS6zZ8,5372
crisscross/scripts/katzi/evolution_analysis/file_renamer.py,sha256=r3ezfzU4gsG8WnoNStWFQ0jy-nPYWoC_F5P5KZEsfUQ,1663
crisscross/scripts/katzi/evolution_analysis/analyse_evo.py,sha256=FPBx2MmWfYnupVCGv6Vv_TE8oyFffT9tIAn7k7d8SH8,5075
crisscross/scripts/katzi/evolution_analysis/plot_distributions.py,sha256=RZbIONjsXlgVJ9LLT7T-J3CejGIunbBuaNwTlPeXBn0,6270
crisscross/scripts/katzi/kinetics_simulations/nucleated_growth.py,sha256=RRYrdNA7Q4BMs2GecqmFq4yblaBrK3khHn4qqff8emM,5911
crisscross/scripts/unfinished_prototypes/quick_plate_refill_script.py,sha256=2CfWX-9jwQ2KTzVZOPxq7iKl9HfKQ67IaPvJpgSPmo0,1347
crisscross/scripts/unfinished_prototypes/PAINT/hexagon_cargo_carpet_design_and_echo.py,sha256=s_8jrNBYQlPGWcy6ZINVbV8AT4qedfudlJNRzso7eCc,3720
crisscross/scripts/unfinished_prototypes/PAINT/singleslatPAINT.py,sha256=jW53lSPTztZ8anHkkA1EWHSb37ZeFeFqzDEjP9bU6KU,4377
crisscross/scripts/unfinished_prototypes/PAINT/singleslatPAINT2.py,sha256=wEhSTUOwmd5kIxMFAUQ8RuE5u7DBFuqNgRIaDoIUhJs,4389
crisscross/scripts/unfinished_prototypes/PAINT/singleslatPAINT_combined.py,sha256=XVTsf3XyA0_MLYPUiTmnhHC7oUcqleHSHpJhH71K63o,3127
crisscross/scripts/unfinished_prototypes/auto_counting/convert_star_to_qupath.py,sha256=mIb5eIxo3zX9FTDnfsxRIZUYoEMg8kOD8SjR2snCB8k,1498
crisscross/scripts/unfinished_prototypes/double_barrel_testing/add_double_barrel_seed_handles.py,sha256=gPHgi-t5I_mQFglKkbnWYv1fOzI4q8wq9Es12mhrGCM,3441
crisscross/scripts/unfinished_prototypes/double_barrel_testing/testing_reversed_seed_placement.py,sha256=CZQUB_AESKHnKsOpF-KMCaNb7Vc3UIA9q1yGIM8s71s,474
crisscross/scripts/unfinished_prototypes/double_barrel_testing/evo_setup_v1.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
crisscross/scripts/unfinished_prototypes/double_barrel_testing/echo_setup_v1.py,sha256=qUd5t5bCZt6NzWLFSaAGJsV-NAGha3nUeQXD36-q5Co,8007
crisscross/scripts/unfinished_prototypes/double_barrel_testing/db_debugging.py,sha256=-Vz4dSUhLTKdDxO6pkaOIgVCw6tmlQ1s7MVFnwcv3Iw,4188
crisscross/cli_functions/working_stock_creation.py,sha256=RXC7SpcWN9ProZQdxPkgvsUjaPWi--CCA_U5fq1rrEw,5704
crisscross/cli_functions/plate_resuspension.py,sha256=XiI60yWk46iMVSa_sb2AeKcxqUn_Rov1XsC-pHToIcE,2834
crisscross/cli_functions/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
crisscross/cli_functions/handle_evolution.py,sha256=Oua4Es4azthzsmZyqxD1gCOU6_MAGUhEVRVE6o2yRcQ,1524
crisscross/core_functions/megastructures.py,sha256=LvyuXMxh9uqDGyw70sA_BRhdIg8AH2c1YS0hdzvHTmk,100584
crisscross/core_functions/megastructure_composition.py,sha256=QJ0tCjcSI-lpmNq2KmeNmfz4KYWho6NWJ8Ev8GGiS10,27392
crisscross/core_functions/slat_design.py,sha256=NlNnMQ4ayNshjk9eiNMm4Zk0Nkkvtdu0ATbsz5xtI0g,5187
crisscross/core_functions/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
crisscross/core_functions/stepwise_plots.py,sha256=1Ond3K-C1KvMs6oAlRuOF0jkuppvEVv_7NFWIUWJdLk,11878
crisscross/core_functions/plate_handling.py,sha256=CEUfkBGj3dska9idCSCnmVBZBDFS8GlURCdN-Fmwt2I,13452
crisscross/core_functions/slats.py,sha256=y1aSRQW457rTjiOmD1UMmW1XU9iOrByCvFvx8BgFfV0,11987
crisscross/core_functions/handle_link_manager.py,sha256=sz6FcIwuPBmCuDPtW2k47Fx7bvdHXcz7lHF-egVgd3g,9027
crisscross/graphics/blender_3d.py,sha256=OSZ4n3sk1MjFhlZ7vhRkAnDwL6dyPI8tMS_gpnUr2rw,30926
crisscross/graphics/pyvista_3d.py,sha256=JihNu0XpPxXBpEcZ8Wp0RdRKnmChJRCizy54onRuJIo,14921
crisscross/graphics/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
crisscross/graphics/static_plots.py,sha256=La0xB09ovI8cGf0gzGi_brErXxruZ_hgxSe9yuVfkjU,20208
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3654_MA_H5_handles_S2C.xlsx,sha256=ZnsEtEYXj7figr0m8cbgRmmtrU1ZgnzpS2m_Delrs3c,14147
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3250_SW_antihandles.xlsx,sha256=Qjr7htJuXtGw3Xc35K7iBSrFdD52oQIjXeoffvCxq2M,12256
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3605_MA_H2_antihandles_S1B.xlsx,sha256=08gFNBLSTkWidmfJ8CW-Yqnf2_YU3f4cqruw1ApA2Ss,17191
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3252_SW_antihandles.xlsx,sha256=HWlfUqUHCkYT2tJYyqT9CAdZsD-Z37n5gGSS1RtmK2E,11650
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3651_MA_H5_handles_S1C.xlsx,sha256=eOTcehHz13JAxA0IpsFaEqmMf0MO4Cnx9jN1E4szoTA,14042
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3653_MA_H5_handles_S2B.xlsx,sha256=frumHdjkI8dvvl9qlHfFadZ6xhz0Rfb9FPE9oa-vncM,17300
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3649_MA_H5_handles_S1A.xlsx,sha256=7HFSA1nSEKeJSkGaFgz47QkAfhvb_QoMHWPuifyXCy8,16960
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3537_MA_h2_antihandles.xlsx,sha256=peL_aHol-8LfRd5a75mSL95Kf8r7EiklHklmKcFSNag,12911
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3601_MA_H5_handles_S1A.xlsx,sha256=WDm-pGPQAYh5wREh9M4h6ITtoDgIfi89WjqcEjgo-20,16960
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3659_MA_H2_antihandles_S2B.xlsx,sha256=yLMelmW5emFm4_5qO3t3gWmuzW52cOJdRQqhaO7566w,17286
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3536_MA_h2_antihandles.xlsx,sha256=igqVtkYB8HGTyikRESMi6iis8rqkY5lp1vfTRA_o0i4,12812
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3650_MA_H5_handles_S1B.xlsx,sha256=Jb-ErSuhw5vnr1SIgTmY_U3f5EV-QjYmdr6nnEcqXgA,17206
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3660_MA_H2_antihandles_S2C.xlsx,sha256=krUzELKIKixuWG5ElLmBS4a9s-EsKpWbn35f8e0aEK8,14169
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3538_MA_h2_antihandles.xlsx,sha256=0MeF0RuEVq64Meda2rwK6Jtipf2pMJNfbk3WxW-pU4k,12112
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3602_MA_H5_handles_S1B.xlsx,sha256=mkVXLwWAh9i53Hu0A2Xb-GtMCNYnJ296xYB1Nw6NF64,17207
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3534_SW_handles.xlsx,sha256=5DWG4HhZWGrUw6_PY8Yzd1A49IqCOgRgxLlMVi8bhdc,12226
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3604_MA_H2_antihandles_S1A.xlsx,sha256=SBv0A7c16KoOQ168Bv8-nY_uS_TVHI1C2VpJ--Ikht4,17009
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3606_MA_H2_antihandles_S1C.xlsx,sha256=3VreOmD2iA-wzBFT6GaCzUSr5jUnRKsWqoZmeP-lp5s,14078
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3652_MA_H5_handles_S2A.xlsx,sha256=8Cg0MzzhhpX63sfdWMYpE8Ahot_AGWDqZJGhqnmRpSc,17070
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3251_CW_antihandles.xlsx,sha256=D10Jy9tTiGbO-T9HUgNTETfECyOngIAdl9fKW7OXXF0,12251
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3533_SW_handles.xlsx,sha256=6kjO5g9PVIcDcRVqFPCdCM-SVA-U0aPTvUk4GPLZHsw,12289
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3656_MA_H2_antihandles_S1B.xlsx,sha256=RX_tffnvpNrGyZLtOzhvLmE4_g8cb_WkeHsKbLmQFsM,17190
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3603_MA_H5_handles_S1C.xlsx,sha256=zqSDVIcfzSQ131y0t-Z42HnJ9dSkdkM6TPaQukrU40U,14043
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3658_MA_H2_antihandles_S2A.xlsx,sha256=vopZYO2O67ZPsDFsnWkCvEANCSAK5cqlmzg-7h_cMKU,17145
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3655_MA_H2_antihandles_S1A.xlsx,sha256=4JET-ci8PO74rZWsTe_ITNSE1Ga6tL6m6gaEDRVLiDg,17008
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3657_MA_H2_antihandles_S1C.xlsx,sha256=QKdhZ7OUmG2Tz3SSqMGb_JCbtqTPaGRHrDstaV3mIWw,14078
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/P3535_SW_handles.xlsx,sha256=bBUMSyQCTOsJC7BD8-Zy5M-IjYgfZdu7aWWbgaDdZDk,11663
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/maximal_order/IDT_spec_sheets/batch_1.xlsx,sha256=UUmRos_t8QLNc56QfZwrTCiPLed6IqsrIUGMehe6e9s,138422
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/maximal_order/IDT_spec_sheets/batch_4.xlsx,sha256=5IDi4Xw-4XX_Z1TSrEQpKURwFjcSUqr8OJt6ccuKsn8,45788
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/maximal_order/IDT_spec_sheets/batch_2.xlsx,sha256=Q_NMx0PBh3o-hzCMNyjfZQRIbkewGP1YR_lKfF600hQ,265143
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/maximal_order/IDT_spec_sheets/batch_3.xlsx,sha256=ufTU_KoI06o5P0gnoJp2LcK-N6lKs3tDBKtXx2Cb_oU,32352
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/maximal_order/IDT_order_sheets/IDT_ORDER_P3651_MA_H5_handles_S1C.xlsx,sha256=Lu59YrYes0egDCF44G2Md1fHrj9jEM4HyHpBoH0EUlA,14797
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/maximal_order/IDT_order_sheets/IDT_ORDER_P3654_MA_H5_handles_S2C.xlsx,sha256=p7tKqvNBrjXKuQnjfL_2LHZGB2m3qb_hSfTvtAdMZe4,14792
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/maximal_order/IDT_order_sheets/IDT_ORDER_P3660_MA_H2_antihandles_S2C.xlsx,sha256=2y02wa6seeAKOJl7f4i0Y0QNOcs2SjyxOa95tpBXwI4,14822
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/maximal_order/IDT_order_sheets/IDT_ORDER_P3659_MA_H2_antihandles_S2B.xlsx,sha256=KYERrI9sBnUxDUzuy5nWAV7BlfJOctMOdUPSrMW8rBM,19691
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/maximal_order/IDT_order_sheets/IDT_ORDER_P3649_MA_H5_handles_S1A.xlsx,sha256=Y82bqwlnb9cp5hs2vtz900VqZXG8yZP5PrR2Ar0h8bc,19495
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/maximal_order/IDT_order_sheets/IDT_ORDER_P3653_MA_H5_handles_S2B.xlsx,sha256=LT5EHuv9OOxImPIiqMtP3kdwCo5GTQQMOSOClMZGM5A,19611
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/maximal_order/IDT_order_sheets/IDT_ORDER_P3650_MA_H5_handles_S1B.xlsx,sha256=S7N2fJ4P3LPhP1binFlcuzAyY4Pr5dqmfciC6dcFjNc,19629
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/maximal_order/IDT_order_sheets/IDT_ORDER_P3655_MA_H2_antihandles_S1A.xlsx,sha256=4unaQO13CpJg_JChejtHdN5Z_bbNT45asal5FbfEfTI,19574
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/maximal_order/IDT_order_sheets/IDT_ORDER_P3657_MA_H2_antihandles_S1C.xlsx,sha256=itPCDxXhQHPs2KUuFUgigYxBQdUbal-ucGmie8XS-Ws,14818
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/maximal_order/IDT_order_sheets/IDT_ORDER_P3658_MA_H2_antihandles_S2A.xlsx,sha256=zwGeLlLx1GJEiUC4aiiiiL-px_5CdC1_qo0Tm2K2VsM,19585
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/maximal_order/IDT_order_sheets/IDT_ORDER_P3652_MA_H5_handles_S2A.xlsx,sha256=C81UoZW3J-maKOAA_YmzkT-87lJ3SvqUnImLuf1TwhU,19510
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/maximal_order/IDT_order_sheets/IDT_ORDER_P3656_MA_H2_antihandles_S1B.xlsx,sha256=u1MJCFqtSDSNNJl24qXdQB4dHHBzspaQZuz56mTrZ70,19683
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/order_1_test/IDT_plate_specs/3601-3603.xlsx,sha256=Zua47P33EnP-k0ne3w8A5FETljmNkM6YrJ-fHpT47cs,106967
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/order_1_test/IDT_plate_specs/3604-3606.xlsx,sha256=DbHh43rptPDHwGVwK4bNgGu3LjQOjHP3SRaFw8kCMlc,103990
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/order_1_test/IDT_order_sheets/IDT_ORDER_P3605_FK_H2_antihandles_S1B.xlsx,sha256=O-Pz4E4XBvcZesODCHds4lMrb2ohYKOwLyw5txmGAGA,19689
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/order_1_test/IDT_order_sheets/IDT_ORDER_P3601_FK_H5_handles_S1A.xlsx,sha256=aUDDWu2i05fkgE8CqTM__vjCE043mpzjSd_SNSgf2aU,19502
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/order_1_test/IDT_order_sheets/IDT_ORDER_P3602_FK_H5_handles_S1B.xlsx,sha256=pPYL65ttFo-wQfOgKK6cweSmShzmAKoh2SqaQBcDYBU,19634
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/order_1_test/IDT_order_sheets/IDT_ORDER_P3604_FK_H2_antihandles_S1A.xlsx,sha256=OMiXBEu-kayaZUsWUDj-5TSB3ADwCSV5fAg6r7c3Inc,19582
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/order_1_test/IDT_order_sheets/IDT_ORDER_P3606_FK_H2_antihandles_S1C.xlsx,sha256=MlXsXWr5e1R1DuX2VO2P57NNoJxu1QMPHj3jJpnLAYo,14824
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/order_1_test/IDT_order_sheets/IDT_ORDER_P3603_FK_H5_handles_S1C.xlsx,sha256=4RxIxdZJ3kmX1UVa3GdvutRe_G23oiTQ2GFY-aj-5to,14803
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/order_1_test/IDT_order_sheets_obfuscated/IDT_ORDER_SCRAMBLED_P3605_FK_H2_antihandles_S1B.xlsx,sha256=fT-TIJfyjaPubFFwqTvPMws8hNX7gJLdaf0ybJGmVSQ,20342
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/order_1_test/IDT_order_sheets_obfuscated/IDT_ORDER_SCRAMBLED_P3601_FK_H5_handles_S1A.xlsx,sha256=1ATEukZPmwyNjoyX43nuRe_RQk8vciZDNSh1KNqqE90,20252
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/order_1_test/IDT_order_sheets_obfuscated/IDT_ORDER_SCRAMBLED_P3604_FK_H2_antihandles_S1A.xlsx,sha256=Wq0psew6lZnpsS8LfubPi9B2_FSGXF3I0RO3sI_3j9s,20313
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/order_1_test/IDT_order_sheets_obfuscated/IDT_ORDER_SCRAMBLED_P3606_FK_H2_antihandles_S1C.xlsx,sha256=hvlDOHCG3E_n6re5Bt91TWR0Re-z1RBV2FOvDkgZqKA,16523
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/order_1_test/IDT_order_sheets_obfuscated/IDT_ORDER_SCRAMBLED_P3602_FK_H5_handles_S1B.xlsx,sha256=p_xgdkHf8OGEKpeDFLhIVk-FXAylM56i5zFAIkm2Qrw,20328
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/new_assembly_handle_library_orders/order_1_test/IDT_order_sheets_obfuscated/IDT_ORDER_SCRAMBLED_P3603_FK_H5_handles_S1C.xlsx,sha256=MW2MyvOWWTIramjWLx8l5W7RsK2VtomJ8dOqe9fLJmI,16587
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/not ordered/PX3_MA_h2_handles.xlsx,sha256=QZp-hXpUQkzF_ek28hjeMAa0mjNK5PvEF6WC4SB6O28,12107
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/not ordered/PX1_MA_h2_handles.xlsx,sha256=u4Yhqr6rbYLc3Wv770P2sP0SZQbfwCA3Fbg2HYSW0Kg,12811
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/not ordered/PX2_MA_h2_handles.xlsx,sha256=OC7SfTsS8whePKgn-1OpEIttve3SFvyFrN4anxqo8Tk,12944
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/previous_names/P3248_SW_handles.xlsx,sha256=5DWG4HhZWGrUw6_PY8Yzd1A49IqCOgRgxLlMVi8bhdc,12226
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/previous_names/P3247_SW_handles.xlsx,sha256=6kjO5g9PVIcDcRVqFPCdCM-SVA-U0aPTvUk4GPLZHsw,12289
crisscross/dna_source_plates/old_plate_format/assembly_handle_plates/previous_names/P3249_SW_handles.xlsx,sha256=bBUMSyQCTOsJC7BD8-Zy5M-IjYgfZdu7aWWbgaDdZDk,11663
crisscross/dna_source_plates/old_plate_format/core_plates/P3621_SSW_seed_plug_center_8064.xlsx,sha256=z-PDu8twwx7wJucaoEJxKHo6LGMrFYumA0lzQtU7_Fw,9675
crisscross/dna_source_plates/old_plate_format/core_plates/sw_src009_control_max.xlsx,sha256=rz-2sGRVbjVvoRcRZgPqs1vKYgFA0QQoHQktKYemLEY,16765
crisscross/dna_source_plates/old_plate_format/core_plates/P3339_JL_seed_plug_corner.xlsx,sha256=j8DuXzCtBAvTgCn3uRd3d-Ae40LbbqqfClZ5yVgxI1Y,13592
crisscross/dna_source_plates/old_plate_format/core_plates/sw_src001_seedcore.xlsx,sha256=5HOhYIFHKdeU188_7g9JJ4OGGXlhXGR92cjx3dtk9ug,29503
crisscross/dna_source_plates/old_plate_format/core_plates/P3578_SSW_3primeTT.xlsx,sha256=yuClM0l95BUhoid0HrxEcDQuQBbaIf-_7ECRIaO_2dU,20573
crisscross/dna_source_plates/old_plate_format/core_plates/P2854_CW_seed_plug_center.xlsx,sha256=U01T2fciya1oqv1VYjburNuSW4w_1BNqU9ZBF_4SO0E,16449
crisscross/dna_source_plates/old_plate_format/core_plates/sw_src002_slatcore.xlsx,sha256=y8k8YiSwbeBPUwkKHtzo_jJJlUq2djwAlBib8YLB6-8,25518
crisscross/dna_source_plates/old_plate_format/core_plates/sw_src004_polyAgridiron.xlsx,sha256=knvNoOG0E5jxuOpoZmCv9Ax0pKqf-1fEOJqHVi_ESYY,17520
crisscross/dna_source_plates/old_plate_format/core_plates/P3555_SSW_combined_seeds.xlsx,sha256=BGOBe7udfwZqF1E3YCV2X_SuOztOrDQ4r7TkEi2oju4,11846
crisscross/dna_source_plates/old_plate_format/core_plates/P3643_MA_combined_seeds_8064.xlsx,sha256=q6NNguck5j6y8cK7PzqsaljQKOJsz596R32-60NF1A8,11906
crisscross/dna_source_plates/old_plate_format/core_plates/spec_sheets/P3643_specs.xlsx,sha256=zzP0tKgfU8MDzTbIf3_2RjsR2PPRMziXDKl_8ykkK4U,22418
crisscross/dna_source_plates/old_plate_format/core_plates/spec_sheets/P3621_specs.xlsx,sha256=o1btWzIqO6DqtP8PY1m3qbQZ5dKZqflZCsHTRsOSalw,13717
crisscross/dna_source_plates/old_plate_format/core_plates/spec_sheets/P3793_3794_specs.xlsx,sha256=Vdo5_q6fDH6JQ-hOt_5YfP_fsv7RNZtp_PpaRm3uwWE,156259
crisscross/dna_source_plates/old_plate_format/cargo_plates/sw_src010_nelson_quimby_bart_edna_maxed.xlsx,sha256=vAE5clSAiWepnmSFsU4jhWDeTgYWiJ_tqRUtA-Kb2AY,14756
crisscross/dna_source_plates/old_plate_format/cargo_plates/sw_src007_nelson_quimby_bart_edna.xlsx,sha256=yBThYrsrWpm0QWRoi7ze9eOHazs0WA50cwczqAAiPaM,18453
crisscross/dna_source_plates/old_plate_format/cargo_plates/sw_src005_antiNelsonQuimby_cc6hb_h2handles.xlsx,sha256=GVrFUTqaLgLy21jrWHl1ZEcRvvB4I54w8c22SWoCW30,19756
crisscross/dna_source_plates/old_plate_format/cargo_plates/P3510_SSW_biotin_obsolete.xlsx,sha256=6f3rTnjHfDMo6kRC3-rnp-zPGExnBJkM1LQ8PMadf1w,11765
crisscross/dna_source_plates/old_plate_format/cargo_plates/P3518_MA_octahedron_patterning_v1.xlsx,sha256=RUCrdLn6O4JS4R_p60akwow-Otd7SVp0z6ZWAJndBW0,14906
crisscross/dna_source_plates/old_plate_format/cargo_plates/sw_src008_lef1-scramble-7hb.xlsx,sha256=sDRCcQteXfmpm_2ppSbY2lcel_Iai6R5Jb5KnKI2z-Q,19007
crisscross/dna_source_plates/old_plate_format/cargo_plates/sw_src004_polyAgridiron.xlsx,sha256=JgFBnN9_m0fc7wSEQk-ZG9fiobsJPWfsCNqXkuDMJvE,17545
crisscross/dna_source_plates/old_plate_format/cargo_plates/P3628_SSW_plate.xlsx,sha256=VC_nI07G4VT-jCyU73oycdY9zfdim1iK14yMbFtO2OM,8192
crisscross/dna_source_plates/old_plate_format/cargo_plates/P3510_SSW_cnt_patterning.xlsx,sha256=dNku7KRk1k9RnUe1mkA0VS-mKxEJ-v4UjrkfB7-et9w,16806
crisscross/dna_source_plates/old_plate_format/cargo_plates/old_format/sw_src007_nelson_quimby_bart_edna.xlsx,sha256=TzIDpEFGhySum1wq5BYe52z-pQ0I0LLYa_bkN5yTIbo,16698
crisscross/dna_source_plates/old_plate_format/cargo_plates/old_format/sw_src005_antiNelsonQuimby_cc6hb_h2handles.xlsx,sha256=VrAjS2NmQ_rMGBFrcw76rN1CO1bncIpbE9Gm6BBAW2g,18081
crisscross/dna_source_plates/old_plate_format/cargo_plates/old_format/P3518_MA_octahedron_patterning_v1.xlsx,sha256=eP3y8RsxxZAFhiB21RNsKB0rer9oZRPhRbpIAcD_ocU,12988
crisscross/dna_source_plates/old_plate_format/cargo_plates/spec_sheets/P3628_specs.xlsx,sha256=2_TSAE0l7aQyzUtbws0dGIxRwugJch62kbDaC09LGtY,9019
crisscross/dna_source_plates/seed_plates/P3621_SSW_seed_plug_center_8064.xlsx,sha256=3mJB4GjKtkH79aFKQi-agEX4rtM9KCYSmmPtpMv-v-k,15087
crisscross/dna_source_plates/seed_plates/P3339_JL_seed_plug_corner.xlsx,sha256=oxtz3sFNUtY552bPSEvLYdx7DEbz8915_2WXOpurrM8,15055
crisscross/dna_source_plates/seed_plates/P2854_CW_seed_plug_center.xlsx,sha256=RPqsSEPEvzwo4n2H0E1S2z276rNupKESAkgFba7vKr4,18746
crisscross/dna_source_plates/seed_plates/P3555_SSW_combined_seeds.xlsx,sha256=10sYPl-HApVWKI_Df3JadGus1R5YZGbP5tHLMcNVxFE,18067
crisscross/dna_source_plates/seed_plates/P3643_MA_combined_seeds_8064.xlsx,sha256=3qfUFuw2CMci1sl9jWvMZecXe7yHQ6or3e2Qh87svGU,26910
crisscross/dna_source_plates/assembly_plates/P3654_MA_H5_handles_S2C.xlsx,sha256=36FNTHi4FGBzL-8CEXqlWTs2U8OJu1OkWbhr1Fu0ths,26123
crisscross/dna_source_plates/assembly_plates/P3250_SW_antihandles.xlsx,sha256=sE1dnwiOoOLfTlMSlmLiPG7RvIJYbGmdw9n0osxJ3H4,25564
crisscross/dna_source_plates/assembly_plates/P3605_MA_H2_antihandles_S1B.xlsx,sha256=whQu1SJxnjJVgFpR-mbRfPquZDjvsS-jJFeOhKhUqOM,25693
crisscross/dna_source_plates/assembly_plates/P3252_SW_antihandles.xlsx,sha256=ga_7HcX3-Ik5pjhQvmyWROLuwvXBlEvDxVnmolOwPiE,21100
crisscross/dna_source_plates/assembly_plates/P3651_MA_H5_handles_S1C.xlsx,sha256=5jxp-Y1vYyY8PrFdK-uARvTcN8WpZeAH4WuEegSogoo,26108
crisscross/dna_source_plates/assembly_plates/P3653_MA_H5_handles_S2B.xlsx,sha256=l5Ztim5ZiRMomX8n4dD0TeClWvhszNAx4qr42uhf44E,31058
crisscross/dna_source_plates/assembly_plates/P3649_MA_H5_handles_S1A.xlsx,sha256=NP4Dc8LtINGpBHuEXiu6CxK2YepXRK0NeRNmpOb5kD8,30952
crisscross/dna_source_plates/assembly_plates/P3537_MA_h2_antihandles.xlsx,sha256=maacLRL2SW2-uznpThgSMQdyNyO7sCDDzNk9W5zaQBY,25648
crisscross/dna_source_plates/assembly_plates/P3601_MA_H5_handles_S1A.xlsx,sha256=ZnqzU2H0Hp3pJNy1vAOQbV4NxqJ8m1oSBo-buAEHIrA,25499
crisscross/dna_source_plates/assembly_plates/P3659_MA_H2_antihandles_S2B.xlsx,sha256=HVVMzgRyCpPXymGs2l5VM32MmHyiMwJAFKFw2b0ZWTw,31099
crisscross/dna_source_plates/assembly_plates/P3536_MA_h2_antihandles.xlsx,sha256=PPuEZKiEkvRqmJLSTEbQeVxqtAxfJWhzn1Rwz-4DtMk,25598
crisscross/dna_source_plates/assembly_plates/P3650_MA_H5_handles_S1B.xlsx,sha256=_HDOk1k9-BdL1_kDF9phdqAB7xmcNyvrEYj95ib9WAI,30987
crisscross/dna_source_plates/assembly_plates/P3660_MA_H2_antihandles_S2C.xlsx,sha256=P4CqrcHws5sDoUPZzp0t7uD3goNAAldGv6jTbgpaZRU,26153
crisscross/dna_source_plates/assembly_plates/P3538_MA_h2_antihandles.xlsx,sha256=lE4Q_w4ddok16cBAMYie3CG8fXtst5PfGxYkQgFX0gI,21124
crisscross/dna_source_plates/assembly_plates/P3602_MA_H5_handles_S1B.xlsx,sha256=nsQASJwfDxXUmjQzRLdMipl3ox9Hi_dVpCQM7uFMyzw,25633
crisscross/dna_source_plates/assembly_plates/P3534_SW_handles.xlsx,sha256=CDP7LHMz1CLkKBtE8wv5ZNbO60LIeIeTvDLtiDjowlE,25576
crisscross/dna_source_plates/assembly_plates/P3604_MA_H2_antihandles_S1A.xlsx,sha256=Xv461T_2DFP0pJv8gwdJSu6nsMlNjgLCuamkDxZ1IUA,25625
crisscross/dna_source_plates/assembly_plates/P3606_MA_H2_antihandles_S1C.xlsx,sha256=fl8YbrcNE5p27YKLIz7iXPmgk86Lf6EEr25rf9S-Tcc,21139
crisscross/dna_source_plates/assembly_plates/P3652_MA_H5_handles_S2A.xlsx,sha256=IhO13yUnSROkHR6nYYepPYp1TwcpIcbSYKA9Iw4IsOA,31004
crisscross/dna_source_plates/assembly_plates/P3251_CW_antihandles.xlsx,sha256=ft6JO1Rwv2Tsydr7TaCRetCKyR3u97k0_MpdPa3M7H0,25635
crisscross/dna_source_plates/assembly_plates/P3533_SW_handles.xlsx,sha256=YZJEG33qPWSjUbvb6h_8LrMXbWC1LMnD_z_aZi5qwsM,25433
crisscross/dna_source_plates/assembly_plates/P3656_MA_H2_antihandles_S1B.xlsx,sha256=tLVpciYJdJmBXo2niHlMA4gIuwlXU-IHLvI5S3xAhfo,31059
crisscross/dna_source_plates/assembly_plates/P3603_MA_H5_handles_S1C.xlsx,sha256=1cT35Tccdzj-7eIG7D-o7k8VGgV-scXuXkfRpoEt574,21107
crisscross/dna_source_plates/assembly_plates/P3658_MA_H2_antihandles_S2A.xlsx,sha256=QyZg1T_wQLkvMdCD9m1QASVTOLC2jw_VO-ts9q019IU,31145
crisscross/dna_source_plates/assembly_plates/P3655_MA_H2_antihandles_S1A.xlsx,sha256=H4W0-JyDzs-FnUStwCIUdcafN4vbHNNerb-Zb9Rf9-A,31081
crisscross/dna_source_plates/assembly_plates/P3657_MA_H2_antihandles_S1C.xlsx,sha256=DZz6V6edM0iyub9Qzs24jro-6ATA62D3DwvMiwO11ZY,26107
crisscross/dna_source_plates/assembly_plates/P3535_SW_handles.xlsx,sha256=3jnpNp_LCN2X6aHkcB5tcdYgfXHVzSYU3efdqVgMHjo,21064
crisscross/dna_source_plates/cargo_plates/sw_src010_nelson_quimby_bart_edna_maxed.xlsx,sha256=mQEx1nRkFmzlBCf8iHD39pl_xIhCuHpcIp8p83R7RMw,20342
crisscross/dna_source_plates/cargo_plates/sw_src007_nelson_quimby_bart_edna.xlsx,sha256=hMhR8tgTByl0E2qt7UzRc-AMWRS2ev8WxEE0XfeM-LI,19886
crisscross/dna_source_plates/cargo_plates/P3837_SSW_fribourg_cnt_2.xlsx,sha256=6-7i2wfzjg_qr0zQ-QEjwedkE1bkfeyffClnjZ1jZuU,21321
crisscross/dna_source_plates/cargo_plates/sw_src005_antiNelsonQuimby_cc6hb_h2handles.xlsx,sha256=k9pUcCxWcNlqxQ2DI_zQSt_dn6vz7mfs1-1bf0Bo2Vc,17410
crisscross/dna_source_plates/cargo_plates/P3518_MA_octahedron_patterning_v1.xlsx,sha256=t3Srly9DjjBgdsIYnZb-ywm8xrKbWYOyfWu7I9tSP7Y,14742
crisscross/dna_source_plates/cargo_plates/P3628_SSW_plate.xlsx,sha256=7hNqpAu19gmoQI0L9Y4_zXHnXL0frRWYUE1UAY1p5QA,12762
crisscross/dna_source_plates/cargo_plates/P3510_SSW_cnt_patterning.xlsx,sha256=ph325xlyPCQNI_8JNmlNYl5BNRGfBIioEr3NHwkZqpo,22315
crisscross/dna_source_plates/cargo_plates/sw_src004_pulldownhandles.xlsx,sha256=FkVXajjdUN2oa7jndmNFUaHshuFSj2r8ApjBj2E48WE,19335
crisscross/dna_source_plates/flat_staple_plates/sw_src009_control_max.xlsx,sha256=83oMm_VhHf9jvM-EiiUO0CELUCPudIuC5yX57OJzA4E,23677
crisscross/dna_source_plates/flat_staple_plates/sw_src002_slatcore.xlsx,sha256=HES1lx2QBuWMMwOtRKkP_KIwS-fcZQQiWPrnZ-2zSto,21330
orthoseq_generator/numeric_functions.py,sha256=SABNoDpGqMztoha9lLvGVTfEOQKqXMokVHC4Qjw8dPY,3965
orthoseq_generator/helper_functions.py,sha256=GKkFUXelgvgPyR2OkgAmAh8V9xSaViNqmZY1gDolQ_M,7920
orthoseq_generator/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
orthoseq_generator/vertex_cover_algorithms.py,sha256=bvSkxriU1BolsNHlBax-_LseOwS6ArgqyP8NtbzeQcU,29135
orthoseq_generator/README.md,sha256=ZhAJ3T7F7y6nu3d7lvsDWj_12uJ_LM40GuPL6mPAZsg,12693
orthoseq_generator/.gitignore,sha256=zb65qadGPnrpD1w1BfSiK9_yq7z3bG7LZRflQBqJhBA,58
orthoseq_generator/search_algorithm.py,sha256=hfl_SyU4ZPDQb9xACVRIQ9aRu8nGNFiMbJkYCvnyrhM,15322
orthoseq_generator/sequence_computations.py,sha256=Zo2IEE2_a6zq9Jv4KIe3zccVzvT2oFxxVCbxfwY8MWA,59304
orthoseq_generator/scripts/run_sequence_search.py,sha256=rfOdHH3xJTQ7-OZTa0hSH-KX2eQuI7IpVXslKNJ6ups,3908
orthoseq_generator/scripts/naive_search.py,sha256=hheKWJ5ZIeMQ0HW_1ZQc8L_cO3dzmA6iAnCbjHReWck,5787
orthoseq_generator/scripts/load_sequences_and_plot.py,sha256=8UKDBPPMCPAwgwXyGU_8zUw4cwDxSt1lgPu4YUt-s1A,1874
orthoseq_generator/scripts/pre_analize_sequences.py,sha256=EqtypCWfyprS1eOXvFwqX7ULUPpPZTOpk9Zuqd9WtyM,3097
orthoseq_generator/scripts/pre_analize_sequences_in_range.py,sha256=ghS7EoxGPiutiDqE6kKC6gF1ZfyABuoU1Xh1gvt2Y1A,2995
orthoseq_generator/scripts/legacy/legacy_sequence_search.py,sha256=Y0n9eTZXti6ju_BLq624nZBL-_DqrDJuq_frI2OYuPU,2854
orthoseq_generator/scripts/legacy/precompute_energies.py,sha256=SmK8y2wRZfP8vrDbyv6btiij2L3Obq7JqXc0jvHsYt4,2701
orthoseq_generator/scripts/figures/results_testing/plots/short_seq_4mer_sigma1p0_subset_compare_results_compare.svg,sha256=pXlThzQdqcWO8LOnf4UeATYGcSztLKY-rGW5VdOJLEU,27934
orthoseq_generator/scripts/figures/results_testing/plots/short_seq_5mer_sigma1p5_subset_compare_results_compare.svg,sha256=cxDJa8DGgc-S30Dd0mRAQpYnTezgbHv47eIefB16B0I,34990
orthoseq_generator/scripts/figures/results_testing/plots/short_seq_5mer_sigma0p5_subset_compare_results_compare.svg,sha256=M6FoTyPH8h0pzKrdqrsjC45MkK0T4jeH8XYqLrmbWeU,37252
orthoseq_generator/scripts/figures/results_testing/plots/short_seq_5mer_sigma1p0_subset_compare_results_compare.svg,sha256=g3DytCMswUSfXmefMdlU1vSnv3kfUMbuAMA4Cl5M-8k,36143
orthoseq_generator/scripts/figures/results_testing/plots/short_seq_5mer_sigma0p25_subset_compare_results_compare.svg,sha256=8rVEuLG6VhGwcqS6FdySkAd4sQm8BATPiaaQkSSST0Q,37112
orthoseq_generator/scripts/figures/figure_2/plot_all_sigma_per_seq.py,sha256=pDyKKKgd7BnXNEfY7j3lelBWxMjKZFqWEnjgsrjyJw0,7994
orthoseq_generator/scripts/figures/figure_2/analyze_conflict_probabilities.py,sha256=Rhrn1NBQGD-tVc4048FPI-nebRS0gRh94TUkfFBCImc,2746
orthoseq_generator/scripts/figures/figure_2/plot_histograms_for_single_sigma_from_csv.py,sha256=ieDzdz0r9_CyVni8f0J3GyElFDgWVI3rYOZZIaFJ458,4065
orthoseq_generator/scripts/figures/figure_2/compute_short_seq_energies.py,sha256=0e_Vn1py2HotKjBbmI35EZNwE5wXqYEWjV8EWK2Gv_o,3366
orthoseq_generator/scripts/figures/figure_2/run_pipeline.py,sha256=PRuypDClKEE7EzFc29-zSsHNqCEHOiFmpDhB-J8vvqc,3632
orthoseq_generator/scripts/figures/figure_2/plots_single_sigma.py,sha256=TXVbYqB2YMrx9c-fEFPC2wpP0kpVhZurgJ9zWNyUWBc,10329
orthoseq_generator/scripts/figures/figure_2/compare_algorithms_from_pkl.py,sha256=OLfW5j2CBNjHZGAKs0AJYOKP3970hMV6aD-yq44-C6Q,14690
orthoseq_generator/scripts/figures/figure_2/plot_all_results_individual.py,sha256=ywBqZ7b5ykMhdCjYMOkP47ooMMMkTCUF3boREhcH1bQ,8644
orthoseq_generator/scripts/figures/figure_2/pipeline_config.example.toml,sha256=JEYa32o2hl98LSF0EAGm7pGRrmFhB77J6DcbvjpPw7U,678
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/test_.toml,sha256=MAro8lGyzsep3crREi2dKg3T7pEAdPMr6e415fzaW88,653
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/server_test_full.sh,sha256=9aqP9Ue3di3uw40ulGwOJezVRKHX6rhzJK2fC0iz5jc,342
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/8mer/server_8mer_sigma0p5.sh,sha256=2UY8scnmC_tvzRwcldE_gdEilRUW7p0HIc2MkIV1RlU,340
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/8mer/server_8mer_sigma0p25.sh,sha256=7kdpespMm5ReLBY66VpN2AhTQgjHO2nNhBnU1bkwChk,341
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/8mer/server_8mer_test_priority.sh,sha256=6XStbQYFFKQ7kMnC0dFE46ab0oJkrB9_oZ-h1Sk0n3c,340
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/8mer/8mer_sigma0p25.toml,sha256=u82X5WgjvmR9FG7SABwgHzeWegns1CepElde7y54ieU,654
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/8mer/8mer_sigma0p5.toml,sha256=TwqDX0C3X1lla5KbpC-Ww8R4O74vrwfqmqj9Q1Zo8Ww,653
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/8mer/server_8mer_master.sh,sha256=4HRUAOuLOHcSa0e4rdUW1ukzOdpr1CC-fuWBRP4GZeA,95
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/6mer/6mer_sigma1.toml,sha256=ZYZltYZHczxMZf9JYmiS0d3rxxyiO__dxjp-k-pABRw,651
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/6mer/server_6mer_sigma0p25.sh,sha256=qLzu9wutuJzGkNEAqVnGuWwmZzOcYm9LOaKTE_EmKLE,337
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/6mer/6mer_sigma1p5.toml,sha256=Tur_ZZdw6QdOAKLzG29gOdj0ZTY0IRS8W9ka48NPqo0,653
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/6mer/server_6mer_sigma0p5.sh,sha256=wux9VPirCna8TKAKKSCx2t6PauRcID98JXLidv0p4ws,336
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/6mer/6mer_sigma0p25.toml,sha256=QadI-vpMapBRg81obGnGPqphDp_r5NV_CZsBDpWP2gc,654
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/6mer/server_6mer_sigma1p5.sh,sha256=H4zC8VisjfdsZJ4TxavzwSZ2voxJtUtaeuvnv4ybBgg,336
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/6mer/server_6mer_sigma1.sh,sha256=Pnj7cCS9uLmM1IPX_SLoeqfV1l35ZCKSg8cqjzME4Lw,334
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/6mer/server_6mer_master.sh,sha256=cOJjsXf48luhDBqP7ZFkpkj2ti_QBnb5Q7XQehKZzgI,155
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/6mer/6mer_sigma0p5.toml,sha256=5wxdcdBrPlfaXKtsuEYCJ83iQyYL_jB57HvibnqKVb8,653
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/6mer/server_6mer_test_priority.sh,sha256=14qIFXQtEodiz_3GO1jSiqo6tv8APKnm_I0Iqk3WOTg,339
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/6mer/resume/server_6mer_sigma1_resume.sh,sha256=hpx1dS5-poCKYT6bfnCUXxGe1huNs6S-lLxwVhcTCIE,399
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/6mer/resume/server_6mer_sigma1p5_resume.sh,sha256=S_N6TEdDyoouFPEjV_Iu6Znp-vKnNhpo3Rmq-AO58AE,403
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/6mer/resume/6mer_sigma1p5_resume.toml,sha256=RmtY6WDFQSdRQgqj_sU3-6rChwI5_uxrh0itbzwnJ6c,460
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/6mer/resume/6mer_sigma1_resume.toml,sha256=GgcKDmtKMKC8KeHs45QAd8D3Xnzp-sC362RJEbo6uJ4,458
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/TTTT_7mers/server_TTTT_7mer_master.sh,sha256=enPpLmtw9Mry6EV7of8B08XtyW5RsuGEDUqhUrGcdE4,175
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/TTTT_7mers/server_TTTT_7mer_sigma1.sh,sha256=1U3fPL9AbS9DAkPfOHpXkc-DWwJIBetPMXFmp1GLigc,468
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/TTTT_7mers/TTTT_7mer_sigma1.toml,sha256=aSbB3lf1XmSdg_PO7NeubTZeZ1gl5BPirmhcQTduat4,660
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/TTTT_7mers/server_TTTT_7mer_sigma1p5.sh,sha256=w1rIT4DPHUKAkcULo6T5WfVzZvuFPXWHPh_jV5t4IGs,476
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/TTTT_7mers/TTTT_7mer_sigma0p25.toml,sha256=JSm_ScK7zreiA-vLzqbkbF85g_GOTeWRnARLmUBp4w8,663
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/TTTT_7mers/server_TTTT_7mer_sigma0p5.sh,sha256=7vXhI13R-iydlxM3L-pxmDG7eetS6Vy0wrdhfYRgF_c,476
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/TTTT_7mers/TTTT_7mer_sigma0p5.toml,sha256=H_EjP9g-lkIxVAiheIJweJFDqxyqfxRhYJXjrXhBpq0,662
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/TTTT_7mers/TTTT_7mer_sigma1p5.toml,sha256=jeS2U-CG1Wd-7bKE7zoevAfR4WGTvGUac8Auvp-2ODE,662
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/TTTT_7mers/server_TTTT_7mer_sigma0p25.sh,sha256=181vvhyuLiY5L51Wh44ca7AIH47orAn7aRZk749fE2s,480
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/TTTT_6mers/TTTT_6mer_sigma1.toml,sha256=Fzg9PorRD81oraXY_Y_NDkgy02NnarCTtc3TGjmH84Y,660
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/TTTT_6mers/server_TTTT_6mer_sigma1.sh,sha256=sWvyabOxU2YAKTQMAWHt4ktm8eaGkYM1Xq4PPRUAeh8,468
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/TTTT_6mers/server_TTTT_6mer_master.sh,sha256=z0n5g787ht8c_GynK-eH7mc6Zf5B2kc5mXLOVE5uwJg,175
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/TTTT_6mers/TTTT_6mer_sigma0p5.toml,sha256=cxj7-UReVldkwHatlvBbiRjpiGh2FGi7KlEj57h3dVI,662
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/TTTT_6mers/server_TTTT_6mer_sigma0p5.sh,sha256=wESZJznFaOLGKqaWqj6rfFpe4pw4avtTQq70ZH0ayuo,476
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/TTTT_6mers/server_TTTT_6mer_sigma1p5.sh,sha256=SILITOB4vAXRoNiY4lviH6IiP_0rsTD--_-E-0DrsW4,476
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/TTTT_6mers/TTTT_6mer_sigma0p25.toml,sha256=GtV4TTW-u48l2XZVJ5GbJzvDHCNd-Iz6VpdmUJcJv8I,663
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/TTTT_6mers/server_TTTT_6mer_sigma0p25.sh,sha256=g_DbySB2e69uGQ8hwngVgeAybjK5FvWXpjVMmsef4vE,480
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/TTTT_6mers/TTTT_6mer_sigma1p5.toml,sha256=0MssFteVZ-V6l9P3RjDNJF4JOjdPu4O45FiiKomP2Y8,662
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/7mer/server_7mer_sigma1p5.sh,sha256=JFk7fmRtKcf6oMWWqx8R1Uamq5XBS-Ig0ZxDMRSihYg,338
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/7mer/server_7mer_sigma0p5.sh,sha256=QRGna2nKMDL7O0z4aaRqSrCtTIfxQk3Gz7wI-FrS0gE,338
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/7mer/7mer_sigma1.toml,sha256=7S9gtM_UnzNwdnF9Jpwm4LAMTa9WiKRcIC2LIB5QUWk,651
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/7mer/7mer_sigma0p25.toml,sha256=0Z9SIq-e8dWh6fOCB968wp6CGmHQlYDLLbRXUR2QnX8,654
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/7mer/7mer_sigma1p5.toml,sha256=WkcbJw2a6TuLY1UOCzbBWUej_xNbA9i5qSyB21lXZmw,653
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/7mer/server_7mer_sigma0p25.sh,sha256=diq2poENEMqQnHyiLw3yDZyTPsdqDuApWvhoia1WcXg,339
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/7mer/server_7mer_master.sh,sha256=N0Vu7TzIH6JawVfu_Axd2K4ZsBWcF7EmoRQFY61-OOU,155
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/7mer/server_7mer_sigma1.sh,sha256=YJKPHJtTQgLjj-KZ7jko153ahBCu4Lk69RWm6BDAVm0,336
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/7mer/7mer_sigma0p5.toml,sha256=CFL5W6QfZdmFBKpONKOsIs7GXfwmX6ao6CnG6T9s1fg,653
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/7mer/server_7mer_test_priority.sh,sha256=AkiYHqxIp50V1-s66uJProJMHMetbC0tv0v2Krr0EBM,339
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/7mer/resume/server_7mer_sigma1_resume.sh,sha256=cZo3fiPl9HDbLhAFKHTTSWZO_up6Fhp832_DJHMi1SE,342
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/7mer/resume/7mer_sigma1p5_resume.toml,sha256=VsnU1eB_VL63GekMa4qXOyJXFxjM-tuH6FaTY6bqSC0,460
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/7mer/resume/server_7mer_sigma1p5_resume.sh,sha256=6vbH_C4wKvfW72UpGVZVqjVo1u6wFc0EVuD1URxjH4I,344
orthoseq_generator/scripts/figures/figure_2/server_run_stuff/7mer/resume/7mer_sigma1_resume.toml,sha256=-S0QoU1u_f7uD2Z0pzKVcHdMnJ0ctHmOEZybhpULvtk,458
orthoseq_generator/scripts/figures/figure_2/data/noflank_results/load_pkl_to_df.py,sha256=jjQ2E3qoUOQXoNkXN7QfVs4do_1cTPJGHKpsjeM7Y5g,327
orthoseq_generator/scripts/auxilary_scripts/compute_energies_from_seq.py,sha256=zLtFqC9hE5E6VkegaS_DBk8WBLJ0Fjgxo3hHugxXfcs,3707
orthoseq_generator/scripts/auxilary_scripts/compute_numeric_independent_set.py,sha256=1YxZHpyc_QMwUSahtciBPgUQ7dIsYhwKZjsuEKIab9s,166
orthoseq_generator/scripts/auxilary_scripts/recreate_old_format_from_single_list.py,sha256=wuw9ASL0hZfhKmYyBsaWiqAezh72j89Fky2-rbHI9r4,1008
orthoseq_generator/scripts/auxilary_scripts/recreate_old_format_from_csv.py,sha256=wuIDnAYhAiZkJ9gn7WCX2LOXoJMgNNz99kK-tfJWInY,936
orthoseq_generator/scripts/auxilary_scripts/energies_to_pkl.py,sha256=CcRgVbF5vT87ivOGJPHvu_2jAYbxgAvAyY-MFmgvxrA,1799
orthoseq_generator/scripts/auxilary_scripts/plot_numeric_independent_set_heatmap.py,sha256=coezO7ISn81GuOJrnGQ8XXx8z8Aqrpmwlws1aAYsZ50,1874
orthoseq_generator/scripts/auxilary_scripts/plot_numeric_independent_set.py,sha256=4_9mgNaUC7S1Qd-BjR9O_RclTqocr0422Z6nZERBoXI,920
orthoseq_generator/scripts/auxilary_scripts/test_seqwalk.py,sha256=Dd0qL2gCfH1CU7QNwoZE3igMbWaQtcX6mXDTd34xQfE,490
orthoseq_generator/scripts/Nupack_only/nupack_only_search_no_conc.py,sha256=TFPTyY2klRjeT0IlmACqQY0Mv-kn5EaB_3grpyMRX2U,8312
orthoseq_generator/scripts/Nupack_only/nupack_validation_2.py,sha256=_sDon2tqdg6FA94zvvpiiipJRFjDFXwZYwCV5Gw2tqg,2363
orthoseq_generator/scripts/Nupack_only/nupack_validation_1.py,sha256=uQYREs4JJHLTjqfFFQN1_sNI53XW5JVIs7fK7ZPa0tE,2973
orthoseq_generator/streamlit_app/state_manager.py,sha256=IEy6teV3ZDMdzxAzpwlWdxwNKoX1IFbGB3pKzjMDBf4,5528
orthoseq_generator/streamlit_app/plotly_utils.py,sha256=B-Z9gxmXaO5HVX4I0fk4ry8iTIpBe6jUMtWhrZeC24o,5932
orthoseq_generator/streamlit_app/__init__.py,sha256=llXYOo2rLlIOCUBpzyUuuQv4Mu7ARvsFv5FnEpqVe4E,56
orthoseq_generator/streamlit_app/orthoseq_app.py,sha256=f5Vh45aM4Jb_Bsdy94qwEBoAjEcWmhDCQZ4rjuUKLi8,5473
orthoseq_generator/streamlit_app/cli.py,sha256=BdFOORFcrIn5wbsQvyeLMGQdl6wGb0XujN5UfW1XVxA,322
orthoseq_generator/streamlit_app/logging_utils.py,sha256=zQvx2gDgLSu4eoFnsDsefEb4iuhG2IrdcDCC0b8A40U,1121
orthoseq_generator/streamlit_app/tabs/tab_selection_helper.py,sha256=Ya4qYU2Vs0gPEaMGnp9gpRG8uCQoNpPfa-eya_p2WFY,6026
orthoseq_generator/streamlit_app/tabs/tab_refinement.py,sha256=IeGq8qLVF1Cl2u-QsWBk7jAE8WvC1XncjWU_LwucAss,6917
orthoseq_generator/streamlit_app/tabs/tab_search.py,sha256=M0GkH3XvAObbyKQwKTs8te_52cSka7bxbPL_WpmCPT0,12453
orthoseq_generator/streamlit_app/tabs/__init__.py,sha256=08AtmuFXlZs9wTAntXmmwKhpvDdfd5pF7oKsqs8HDRY,206
orthoseq_generator/streamlit_app/tabs/tab_exploratory.py,sha256=BSjSaRHSKoB5OR3yhrZjKdmV6CL4Kct8HIB5KR626TU,5751
orthoseq_generator/streamlit_app/graphics/on_target.png,sha256=db6nvCFi1Mvd24Dnh1SZJySJCixQF6c1mpJg2jhpdu4,82402
crisscross_kit-1.2.4.dist-info/RECORD,,
crisscross_kit-1.2.4.dist-info/WHEEL,sha256=3iWGt3ZRqL8bd3jDYJl5cT68kBeEqDf8qA7Ulp_ILlc,136
crisscross_kit-1.2.4.dist-info/entry_points.txt,sha256=6bNrlNiqn71HdvDQohCnWJt94T-BBBCI-CE4Hsmu6ds,335
crisscross_kit-1.2.4.dist-info/top_level.txt,sha256=Ew72BWpaAacMcMkDAb07Bl5xkcLNKfGixUjNO-YhNjw,39
crisscross_kit-1.2.4.dist-info/METADATA,sha256=1Xq5v1_OVaH2pfNfxIR1vQQr4lgKkUbYA603CHsymDY,2703
eqcorr2d/CMakeLists.txt,sha256=x6u__Gap95U4o-OKqEwibPqQ5WUB1vLEwt8V5h_9X4Y,4885
eqcorr2d/eqcorr2d_engine.cpython-311-darwin.so,sha256=uBeCQ4tfXTEIGqR8yx2TuA2UI3Stk5cJzClm80FU68Y,52952
eqcorr2d/slat_standardized_mapping.py,sha256=V6Q-g18iCu7fmO6QtkEncgy-4bJUxssGehlQOcfPTRk,8576
eqcorr2d/__init__.py,sha256=GEBMt2H1hAdKq2rArC-o_YQ2Frd2-gR-9wu1xY1kuyA,213
eqcorr2d/eqcorr2d_interface.py,sha256=x3ylHSSR8ZiXvTLmmc3dj9GlmGHBK8FJBRVVEyJ5d9U,27153
eqcorr2d/debug_driver.py,sha256=ni-kSdqVmAuN1F9gHT1KZ910vT9fGj0VkLAtpSyUOXY,7594
eqcorr2d/eqcorr2d_engine.pyi,sha256=-d4buLJYLJ1CHfVfEEZqc0ZBI6I5EcdnKValAXiOosM,581
eqcorr2d/rot60.py,sha256=ErHoIjSGpvMdl26hc12DruIRoplz0J2kPSiGXKnWbU0,4100
eqcorr2d/scripts/testing_eqcorr2d_interfacing.py,sha256=RAUaOMR6XnZ2qLKIk9TT1FHgNJtibXpAK0CFrneUSc4,1759
eqcorr2d/scripts/debugging_new_evo.py,sha256=wZMNXuxYPvt03gd8NDF8tXgYMYN0pR9-8mcVFlPOmqI,2634
eqcorr2d/scripts/verify_results_eqcorr2d.py,sha256=0VIeRb97J_EBt-_9Biv4V08nl-B3bh0mjwV1yofVHpY,9592
eqcorr2d/c_sources/eqcorr2d_bindings.c,sha256=ipH-ll996wu9x_5pRMLsXrPW-kzDcQT3uhzbDtv3tk0,11875
eqcorr2d/c_sources/eqcorr2d.h,sha256=5AvAUzLT5QOaCzFm3DG2Vcz272lK6QQv-89v9baOorw,2302
eqcorr2d/c_sources/main.c,sha256=mgu7ADwShfBC7TRc4lXvWJNJyIYFS7nR35LyAd0HJI4,1853
eqcorr2d/c_sources/eqcorr2d_core.c,sha256=Ifrg7IeP_R_jmRWbDnKKS4HrdHXbjIC8h3dEv0MTYNs,5798
