COMMAND_ID=96dd18c1-751e-4899-b8bb-15268bd33594
{
  "Status": "Success",
  "Stderr": "",
  "Stdout": "{\n  \"active_ilmn_job_count\": 7,\n  \"active_ilmn_jobs\": [\n    {\n      \"job_id\": \"694\",\n      \"name\": \"haplocheck_vcf_contam_identity-20260526-LH01121-0004-B23WW2NLT4-NA00232-SMN-all-S46-PF-ILMN-NOVASEQ\",\n      \"state\": \"RUNNING\",\n      \"time\": \"1:29:30\"\n    },\n    {\n      \"job_id\": \"620\",\n      \"name\": \"haplocheck_vcf_contam_identity-20260526-LH01121-0004-B23WW2NLT4-HG003-c-GIAB-all-S9-PF-ILMN-NOVASEQ\",\n      \"state\": \"RUNNING\",\n      \"time\": \"1:30:49\"\n    },\n    {\n      \"job_id\": \"561\",\n      \"name\": \"haplocheck_vcf_contam_identity-20260526-LH01121-0004-B23WW2NLT4-HG003-a-GIAB-all-S7-PF-ILMN-NOVASEQ\",\n      \"state\": \"RUNNING\",\n      \"time\": \"1:31:49\"\n    },\n    {\n      \"job_id\": \"487\",\n      \"name\": \"haplocheck_vcf_contam_identity-20260526-LH01121-0004-B23WW2NLT4-HG003-b-GIAB-all-S8-PF-ILMN-NOVASEQ\",\n      \"state\": \"RUNNING\",\n      \"time\": \"1:33:13\"\n    },\n    {\n      \"job_id\": \"417\",\n      \"name\": \"haplocheck_vcf_contam_identity-20260526-LH01121-0004-B23WW2NLT4-NA09677-SMN-all-S47-PF-ILMN-NOVASEQ\",\n      \"state\": \"RUNNING\",\n      \"time\": \"1:35:23\"\n    },\n    {\n      \"job_id\": \"351\",\n      \"name\": \"haplocheck_vcf_contam_identity-20260526-LH01121-0004-B23WW2NLT4-NA03986-DMPK-all-S48-PF-ILMN-NOVASEQ\",\n      \"state\": \"RUNNING\",\n      \"time\": \"1:38:08\"\n    },\n    {\n      \"job_id\": \"256\",\n      \"name\": \"haplocheck_vcf_contam_identity-20260526-LH01121-0004-B23WW2NLT4-NA05164-DMPK-all-S49-PF-ILMN-NOVASEQ\",\n      \"state\": \"RUNNING\",\n      \"time\": \"1:42:36\"\n    }\n  ],\n  \"error_marker_count\": 0,\n  \"error_markers_tail\": [],\n  \"finished_lines\": 714,\n  \"latest_log\": \"/fsx/analysis_results/ubuntu/hybonly_ilmn_kitchensink_mounted_20260606T053415Z/daylily-omics-analysis/.snakemake/log/2026-06-06T055941.967267.snakemake.log\",\n  \"latest_log_mtime\": 1780732878.0,\n  \"latest_progress\": {\n    \"done\": 714,\n    \"line\": 25226,\n    \"pct\": \"98%\",\n    \"text\": \"714 of 729 steps (98%) done\",\n    \"total\": 729\n  },\n  \"line_count\": 25226,\n  \"logs_found\": 1,\n  \"max_progress\": {\n    \"done\": 714,\n    \"line\": 25226,\n    \"pct\": \"98%\",\n    \"text\": \"714 of 729 steps (98%) done\",\n    \"total\": 729\n  },\n  \"progress_tail\": [\n    {\n      \"done\": 705,\n      \"line\": 25182,\n      \"pct\": \"97%\",\n      \"text\": \"705 of 729 steps (97%) done\",\n      \"total\": 729\n    },\n    {\n      \"done\": 706,\n      \"line\": 25185,\n      \"pct\": \"97%\",\n      \"text\": \"706 of 729 steps (97%) done\",\n      \"total\": 729\n    },\n    {\n      \"done\": 707,\n      \"line\": 25188,\n      \"pct\": \"97%\",\n      \"text\": \"707 of 729 steps (97%) done\",\n      \"total\": 729\n    },\n    {\n      \"done\": 708,\n      \"line\": 25191,\n      \"pct\": \"97%\",\n      \"text\": \"708 of 729 steps (97%) done\",\n      \"total\": 729\n    },\n    {\n      \"done\": 709,\n      \"line\": 25194,\n      \"pct\": \"97%\",\n      \"text\": \"709 of 729 steps (97%) done\",\n      \"total\": 729\n    },\n    {\n      \"done\": 710,\n      \"line\": 25197,\n      \"pct\": \"97%\",\n      \"text\": \"710 of 729 steps (97%) done\",\n      \"total\": 729\n    },\n    {\n      \"done\": 711,\n      \"line\": 25200,\n      \"pct\": \"98%\",\n      \"text\": \"711 of 729 steps (98%) done\",\n      \"total\": 729\n    },\n    {\n      \"done\": 712,\n      \"line\": 25203,\n      \"pct\": \"98%\",\n      \"text\": \"712 of 729 steps (98%) done\",\n      \"total\": 729\n    },\n    {\n      \"done\": 713,\n      \"line\": 25206,\n      \"pct\": \"98%\",\n      \"text\": \"713 of 729 steps (98%) done\",\n      \"total\": 729\n    },\n    {\n      \"done\": 714,\n      \"line\": 25226,\n      \"pct\": \"98%\",\n      \"text\": \"714 of 729 steps (98%) done\",\n      \"total\": 729\n    }\n  ],\n  \"repo\": \"/fsx/analysis_results/ubuntu/hybonly_ilmn_kitchensink_mounted_20260606T053415Z/daylily-omics-analysis\",\n  \"session\": \"hybonly_ilmn_kitchensink_mounted_20260606T053415Z\",\n  \"squeue_returncode\": 0,\n  \"squeue_stderr\": \"\",\n  \"submitted_lines\": 632\n}\n"
}
