DAY-EC activated.
DAY-EC activated.
time_utc=2026-06-06T03:11:49Z
df=/fsx
Filesystem                Size  Used Avail Use% Mounted on
10.0.1.131@tcp:/ovxjlb4v  8.8T  346G  8.4T   4% /fsx
tmux=hybonly_stage_ilmn_20260606T010256Z
tmux_state=absent
tmux=hybonly_stage_ilmn_parallel_20260606T010256Z
tmux_state=running
ilmn_counts
fastq_files=1
parallel_done=0
parallel_errors=0
ilmn_dir_tail
2026-06-06T02:54:19.0000000000	36755885403	Altair-HG001-a_S1_R1_001.fastq.gz
stage_processes
ubuntu     35307       1  0 03:10 ?        00:00:00 cp -- /fsx/run_dir_mounts/ilmn-lh01121-b23ww2nlt4-fastq/Altair-HG001-a_S1_R2_001.fastq.gz /fsx/scratch/ILMN/tmp/Altair-HG001-a_S1_R2_001.fastq.gz.tmp.$$
ubuntu     35440   25793  0 03:10 pts/2    00:00:00 bash -l -c /home/ubuntu/hyb_only_stage_ilmn_parallel_20260606T010256Z.sh > /fsx/scratch/ILMN/logs/tmux_stage_ilmn_parallel.stdout.txt 2> /fsx/scratch/ILMN/logs/tmux_stage_ilmn_parallel.stderr.txt; rc=$?; echo $rc > /fsx/scratch/ILMN/logs/tmux_stage_ilmn_parallel.rc; exit $rc
ubuntu     35489   35440  0 03:10 pts/2    00:00:00 bash /home/ubuntu/hyb_only_stage_ilmn_parallel_20260606T010256Z.sh
ubuntu     35500   35489  0 03:10 pts/2    00:00:00 xargs -n 2 -P 4 bash -c stage_one "$1" "$2" _
ubuntu     35517   35502  0 03:10 pts/2    00:00:00 cp -- /fsx/run_dir_mounts/ilmn-lh01121-b23ww2nlt4-fastq/Altair-HG001-a_S1_R2_001.fastq.gz /fsx/scratch/ILMN/tmp/Altair-HG001-a_S1_R2_001.fastq.gz.tmp.ip-10-0-0-81.35502.5499
ubuntu     35518   35503  0 03:10 pts/2    00:00:00 cp -- /fsx/run_dir_mounts/ilmn-lh01121-b23ww2nlt4-fastq/Altair-HG001-b_S2_R1_001.fastq.gz /fsx/scratch/ILMN/tmp/Altair-HG001-b_S2_R1_001.fastq.gz.tmp.ip-10-0-0-81.35503.20418
ubuntu     35519   35501 99 03:10 pts/2    00:01:35 gzip -t /fsx/scratch/ILMN/Altair-HG001-a_S1_R1_001.fastq.gz
ubuntu     35520   35504  0 03:10 pts/2    00:00:00 cp -- /fsx/run_dir_mounts/ilmn-lh01121-b23ww2nlt4-fastq/Altair-HG001-b_S2_R2_001.fastq.gz /fsx/scratch/ILMN/tmp/Altair-HG001-b_S2_R2_001.fastq.gz.tmp.ip-10-0-0-81.35504.8292
parallel_log_tail
start_ilmn_parallel	2026-06-06T03:10:13Z	jobs=4
Filesystem                Size  Used Avail Use% Mounted on
10.0.1.131@tcp:/ovxjlb4v  8.8T  293G  8.5T   4% /fsx
parallel_rc
