DAY-EC activated.
DAY-EC activated.
time_utc=2026-06-06T03:16:01Z
df=/fsx
Filesystem                Size  Used Avail Use% Mounted on
10.0.1.131@tcp:/ovxjlb4v  8.8T  500G  8.3T   6% /fsx
tmux=hybonly_stage_ont_20260606T010256Z
tmux_state=running
DAY-EC activated.























ont_dir
total 112G
-rw-rw-r-- 1 ubuntu ubuntu 48G Jun  6 02:42 NA00232_SMN_R1_all.fastq.gz
-rw-rw-r-- 1 ubuntu ubuntu 64G Jun  6 03:07 NA09677_SMN_R1_all.fastq.gz
drwxrwxr-x 2 ubuntu ubuntu 33K Jun  6 02:32 logs
drwxrwxr-x 2 ubuntu ubuntu 33K Jun  6 02:55 manifests
drwxrwxr-x 2 ubuntu ubuntu 33K Jun  6 03:07 tmp
ont_tmp_dir
total 13K
-rw-rw-r-- 1 ubuntu ubuntu 26K Jun  6 02:55 NA09677.paths.25844
stage_processes
ubuntu     25793       1  0 02:32 ?        00:00:00 tmux new-session -d -s hybonly_stage_ont_20260606T010256Z bash -l -c '/home/ubuntu/hyb_only_stage_ont_data_20260606T010256Z.sh > /fsx/scratch/ONT/logs/tmux_stage_ont.stdout.txt 2> /fsx/scratch/ONT/logs/tmux_stage_ont.stderr.txt; rc=$?; echo $rc > /fsx/scratch/ONT/logs/tmux_stage_ont.rc; exit $rc'
ubuntu     25794   25793  0 02:32 pts/0    00:00:00 bash -l -c /home/ubuntu/hyb_only_stage_ont_data_20260606T010256Z.sh > /fsx/scratch/ONT/logs/tmux_stage_ont.stdout.txt 2> /fsx/scratch/ONT/logs/tmux_stage_ont.stderr.txt; rc=$?; echo $rc > /fsx/scratch/ONT/logs/tmux_stage_ont.rc; exit $rc
ubuntu     25844   25794  0 02:32 pts/0    00:00:00 bash /home/ubuntu/hyb_only_stage_ont_data_20260606T010256Z.sh
ubuntu     34730   25844 99 03:07 pts/0    00:08:59 gzip -t /fsx/scratch/ONT/NA09677_SMN_R1_all.fastq.gz
ubuntu     35519   35501 99 03:10 pts/2    00:05:47 gzip -t /fsx/scratch/ILMN/Altair-HG001-a_S1_R1_001.fastq.gz
ubuntu     37100   35504 99 03:14 pts/2    00:01:35 gzip -t /fsx/scratch/ILMN/Altair-HG001-b_S2_R2_001.fastq.gz
ubuntu     37102   35502 99 03:14 pts/2    00:01:35 gzip -t /fsx/scratch/ILMN/Altair-HG001-a_S1_R2_001.fastq.gz
ubuntu     37104   35503 99 03:14 pts/2    00:01:33 gzip -t /fsx/scratch/ILMN/Altair-HG001-b_S2_R1_001.fastq.gz
ont_log_tail
start_ont	2026-06-06T02:32:53Z
Filesystem                Size  Used Avail Use% Mounted on
10.0.1.131@tcp:/ovxjlb4v  8.8T   92M  8.8T   1% /fsx
CMD	2026-06-06T02:32:53Z	cat 219 sources to /fsx/scratch/ONT/NA00232_SMN_R1_all.fastq.gz
DONE	2026-06-06T02:55:16Z	NA00232	/fsx/scratch/ONT/NA00232_SMN_R1_all.fastq.gz	51444000878
CMD	2026-06-06T02:55:17Z	cat 228 sources to /fsx/scratch/ONT/NA09677_SMN_R1_all.fastq.gz
ont_rc
