README.md
pyproject.toml
genebeddings/__init__.py
genebeddings/genebeddings.py
genebeddings.egg-info/PKG-INFO
genebeddings.egg-info/SOURCES.txt
genebeddings.egg-info/dependency_links.txt
genebeddings.egg-info/requires.txt
genebeddings.egg-info/top_level.txt
genebeddings/benchmarks/__init__.py
genebeddings/benchmarks/dependency_map.py
genebeddings/benchmarks/enhanced_pathogenicity_benchmark.py
genebeddings/benchmarks/epistasis.py
genebeddings/benchmarks/epistasis_dependency_map.py
genebeddings/benchmarks/epistasis_geometry.py
genebeddings/benchmarks/evaluate.py
genebeddings/benchmarks/nt_benchmark.py
genebeddings/benchmarks/pathogenicity_benchmark.py
genebeddings/benchmarks/run_pathogenicity_benchmark.py
genebeddings/benchmarks/simple_fine_tune.py
genebeddings/benchmarks/test_consequence_filtering.py
genebeddings/benchmarks/test_enhanced_benchmark.py
genebeddings/benchmarks/variants.py
genebeddings/wrappers/__init__.py
genebeddings/wrappers/alphagenome_wrapper.py
genebeddings/wrappers/base_wrapper.py
genebeddings/wrappers/borzoi_wrapper.py
genebeddings/wrappers/caduceus_wrapper.py
genebeddings/wrappers/conformer_wrapper.py
genebeddings/wrappers/convnova_wrapper.py
genebeddings/wrappers/dnabert_wrapper.py
genebeddings/wrappers/evo2_wrapper.py
genebeddings/wrappers/genomenet_wrapper.py
genebeddings/wrappers/gpn_msa_wrapper.py
genebeddings/wrappers/hyenadna_wrapper.py
genebeddings/wrappers/mutbert_wrapper.py
genebeddings/wrappers/nt_wrapper.py
genebeddings/wrappers/rinalmo_wrapper.py
genebeddings/wrappers/specieslm_wrapper.py
genebeddings/wrappers/spliceai_wrapper.py
genebeddings/wrappers/splicebert_wrapper.py