tree op• 数据种类:text → table
• 调用: import fullseye as fs; fs.ledger.tree_from_swc(swc)(要直接调用实现,import treemorph; treemorph.tree_from_swc(swc);从台账取用则 opsgraph.get("tree_from_swc"))
> 该算子的说明尚无译文,以下照原文给出。
Parse an SWC text (or a path to a .swc file) into a checked tree table.
Returns a dict with id (n,), type (n,), xyz (n, 3), radius (n,), parent_index (n,; -1 for the root, otherwise the row of the parent) and root (row of the root). Rows keep the file order. Comment lines (#) and blank lines are skipped.
Raises ValueError: not a string; a data line with fewer than 7 fields or unparsable numbers; no nodes; duplicate ids; zero or more than one root (parent == -1); a parent id that is not smaller than its child's; a parent id that does not exist; non-finite coordinates or radius; a negative radius; more than MAX_TREE_NODES nodes.
• 示例数据目录(下载 URL / 许可证) —— 2-D 用 skimage.data(BSD/公有领域)加合成图,3-D 给出真实数据源(Stanford/PDS 等)的下载 URL。
• 算子来历与参考文献 —— 该算子族所依据的研究/方法出处。
• 算法的正典(作者、年份)与用途见上面的族使用指南。
• poc_skeleton_run_length_vs_voi — py -3.11 examples/poc_skeleton_run_length_vs_voi.py
• poc_swc_tree_truth — py -3.11 examples/poc_swc_tree_truth.py
• poc_worm_neurites_grow — py -3.11 examples/poc_worm_neurites_grow.py
• poc_worm_synapses_vs_neurites — py -3.11 examples/poc_worm_synapses_vs_neurites.py
table 作为输入)graph_edge_consensus · graph_core_persistence · tree_morphometry · tree_sholl · tree_run_length
tree)tree_morphometry · tree_sholl · tree_run_length
*Provenance: treemorph.py — GRAPH 算子登记表。本条目由 tools/opdocs.py md 自动生成(请勿手工编辑)。*
© 2026 Kazufumi Furuse — Fullseye operator documentation. Licensed under Apache-2.0.