Coverage report: 57%

Files Functions Classes

coverage.py v7.11.0, created at 2025-11-07 15:47 -0600

File class statements missing excluded coverage
src/instawell/__init__.py (no class) 17 0 0 100%
src/instawell/cli.py (no class) 200 200 0 0%
src/instawell/core/__init__.py (no class) 0 0 0 100%
src/instawell/core/data_models.py Replicate 0 0 0 100%
src/instawell/core/data_models.py UniqueCondition 0 0 0 100%
src/instawell/core/data_models.py (no class) 13 0 0 100%
src/instawell/core/exceptions.py PrerequisiteStepError 0 0 0 100%
src/instawell/core/exceptions.py DataIntegrityError 0 0 0 100%
src/instawell/core/exceptions.py ConditionParsingError 0 0 0 100%
src/instawell/core/exceptions.py FigureGenerationError 0 0 0 100%
src/instawell/core/exceptions.py (no class) 8 0 0 100%
src/instawell/core/exp_context.py ExperimentContext 29 5 0 83%
src/instawell/core/exp_context.py (no class) 42 0 0 100%
src/instawell/core/parser.py (no class) 40 2 0 95%
src/instawell/core/steps.py StepFiles 0 0 0 100%
src/instawell/core/steps.py (no class) 10 0 0 100%
src/instawell/figures/__init__.py (no class) 0 0 0 100%
src/instawell/figures/fig_01_raw.py (no class) 19 19 0 0%
src/instawell/figures/fig_02_averaged.py (no class) 24 24 0 0%
src/instawell/figures/fig_03_bgsub_raw.py (no class) 24 24 0 0%
src/instawell/figures/fig_04_bgsub_minmax.py (no class) 24 24 0 0%
src/instawell/figures/fig_05_derivative.py (no class) 24 24 0 0%
src/instawell/figures/fig_06_min_temp.py (no class) 21 21 0 0%
src/instawell/processing/__init__.py (no class) 0 0 0 100%
src/instawell/processing/step_00_setup_experiment.py (no class) 37 1 0 97%
src/instawell/processing/step_01_ingest_data.py (no class) 86 5 0 94%
src/instawell/processing/step_02_filter_wells.py (no class) 37 3 0 92%
src/instawell/processing/step_03_average_replicates.py (no class) 34 2 0 94%
src/instawell/processing/step_04_subtract_background.py (no class) 47 1 0 98%
src/instawell/processing/step_05_minmax_scale.py (no class) 31 5 0 84%
src/instawell/processing/step_06_calc_derivative.py (no class) 30 4 0 87%
src/instawell/processing/step_07_find_min_temp.py (no class) 28 2 0 93%
src/instawell/utils/__init__.py (no class) 0 0 0 100%
src/instawell/utils/logging_util.py (no class) 31 1 0 97%
src/instawell/utils/utils.py (no class) 28 9 0 68%
Total   884 376 0 57%

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