Metadata-Version: 2.4
Name: biocracker
Version: 2.0.3
Summary: BioCracker is a parser for antiSMASH output GenBank files
Project-URL: Homepage, https://github.com/moltools/biocracker
Project-URL: Repository, https://github.com/moltools/biocracker
Project-URL: Issues, https://github.com/moltools/biocracker/issues
Project-URL: Documentation, https://github.com/moltools/biocracker#readme
Author-email: David Meijer <david.meijer@wur.nl>
License-Expression: MIT
License-File: LICENSE
Keywords: antismash,parser
Classifier: Development Status :: 5 - Production/Stable
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Python: <3.12,>=3.10
Requires-Dist: biopython
Requires-Dist: ijson
Requires-Dist: joblib
Requires-Dist: numpy==1.23.0
Requires-Dist: pyhmmer
Requires-Dist: scikit-learn==1.2.0
Requires-Dist: tqdm
Provides-Extra: dev
Requires-Dist: pytest; extra == 'dev'
Requires-Dist: ruff; extra == 'dev'
Description-Content-Type: text/markdown

# BioCracker

<p align="center">
    <a href="https://github.com/moltools/biocracker/actions/workflows/tests.yml">
      <img alt="testing & quality" src="https://github.com/moltools/biocracker/actions/workflows/tests.yml/badge.svg" /></a>
    <a href="https://pypi.org/project/biocracker">
      <img alt="PyPI" src="https://img.shields.io/pypi/v/biocracker" /></a>
    <a href="https://pypi.org/project/biocracker">
      <img alt="PyPI - Python Version" src="https://img.shields.io/pypi/pyversions/biocracker" /></a>
    <a href="https://doi.org/10.5281/zenodo.17524264">
      <img src="https://zenodo.org/badge/DOI/10.5281/zenodo.17524264.svg" alt="DOI" /></a>
</p>

Parser for antiSMASH output GenBank files.

## Installation

We recommend installing BioCracker in a virtual conda environment, based on the provided `environment.yml` file to make sure all modules are available:

```bash
conda env create -f environment.yml
```

## Development

To set up a development environment, use the provided `environment.dev.yml` file:

```bash
conda env create -f environment.dev.yml
```
