=== STDOUT ===
19:42:07 Test 5: Hyperparameter Sensitivity of Rankings [CONFIRMATORY]
19:42:07 Prereg: PREREGISTRATION_CONFIRMATORY_ROBUSTNESS.md
19:42:07 Leiden resolutions: [0.5, 1.0, 2.0]
19:42:07 kNN k values: [15, 30, 90]

============================================================
19:42:14 Processing tissue: lung
19:42:14 Pulling source cells...
  Source: 2000 cells
19:48:09 Pulling target cells...
  Target: 2000 cells

19:51:07 Leiden sweep: lung_geneformer
    19:52:51 resolution=0.5
    19:53:02 resolution=1.0
    19:53:02 resolution=2.0
19:53:02 kNN sweep: lung_geneformer
    19:53:02 k=15
[34mINFO    [0m CD16-negative, CD56-bright natural killer cell, human consists of a    
         single batch or is too small. Skip.                                    
[34mINFO    [0m CD16-positive, CD56-dim natural killer cell, human consists of a single
         batch or is too small. Skip.                                           
[34mINFO    [0m CD4-positive helper T cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m CD8-positive, alpha-beta memory T cell, CD45RO-positive consists of a  
         single batch or is too small. Skip.                                    
[34mINFO    [0m T cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m alpha-beta T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m alveolar type [1;36m1[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m alveolar type [1;36m2[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m animal cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m blood vessel endothelial cell consists of a single batch or is too     
         small. Skip.                                                           
[34mINFO    [0m chondrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m ciliated cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m ciliated columnar cell of tracheobronchial tree consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell, human consists of a single batch or is too small. Skip.
[34mINFO    [0m effector CD4-positive, alpha-beta T cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m effector memory CD8-positive, alpha-beta T cell, terminally            
         differentiated consists of a single batch or is too small. Skip.       
[34mINFO    [0m elicited macrophage consists of a single batch or is too small. Skip.  
[34mINFO    [0m epithelial cell of lower respiratory tract consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m goblet cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m intermediate monocyte consists of a single batch or is too small. Skip.
[34mINFO    [0m lung macrophage consists of a single batch or is too small. Skip.      
[34mINFO    [0m lung microvascular endothelial cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m lung neuroendocrine cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m lung pericyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m mature NK T cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mature alpha-beta T cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m mesothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mesothelial fibroblast consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mucus secreting cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid leukocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m myofibroblast cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m naive B cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m naive thymus-derived CD4-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m naive thymus-derived CD8-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m plasmacytoid dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m pulmonary artery endothelial cell consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m pulmonary interstitial fibroblast consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m squamous epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m stromal cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m tracheobronchial smooth muscle cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m vascular associated smooth muscle cell consists of a single batch or is
         too small. Skip.                                                       
    19:53:17 k=30
[34mINFO    [0m CD16-negative, CD56-bright natural killer cell, human consists of a    
         single batch or is too small. Skip.                                    
[34mINFO    [0m CD16-positive, CD56-dim natural killer cell, human consists of a single
         batch or is too small. Skip.                                           
[34mINFO    [0m CD4-positive helper T cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m CD8-positive, alpha-beta memory T cell, CD45RO-positive consists of a  
         single batch or is too small. Skip.                                    
[34mINFO    [0m T cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m alpha-beta T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m alveolar type [1;36m1[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m alveolar type [1;36m2[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m animal cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m blood vessel endothelial cell consists of a single batch or is too     
         small. Skip.                                                           
[34mINFO    [0m chondrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m ciliated cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m ciliated columnar cell of tracheobronchial tree consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell, human consists of a single batch or is too small. Skip.
[34mINFO    [0m effector CD4-positive, alpha-beta T cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m effector memory CD8-positive, alpha-beta T cell, terminally            
         differentiated consists of a single batch or is too small. Skip.       
[34mINFO    [0m elicited macrophage consists of a single batch or is too small. Skip.  
[34mINFO    [0m epithelial cell of lower respiratory tract consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m goblet cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m intermediate monocyte consists of a single batch or is too small. Skip.
[34mINFO    [0m lung macrophage consists of a single batch or is too small. Skip.      
[34mINFO    [0m lung microvascular endothelial cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m lung neuroendocrine cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m lung pericyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m mature NK T cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mature alpha-beta T cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m mesothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mesothelial fibroblast consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mucus secreting cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid leukocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m myofibroblast cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m naive B cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m naive thymus-derived CD4-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m naive thymus-derived CD8-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m plasmacytoid dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m pulmonary artery endothelial cell consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m pulmonary interstitial fibroblast consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m squamous epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m stromal cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m tracheobronchial smooth muscle cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m vascular associated smooth muscle cell consists of a single batch or is
         too small. Skip.                                                       
    19:53:27 k=90
[34mINFO    [0m CD16-negative, CD56-bright natural killer cell, human consists of a    
         single batch or is too small. Skip.                                    
[34mINFO    [0m CD16-positive, CD56-dim natural killer cell, human consists of a single
         batch or is too small. Skip.                                           
[34mINFO    [0m CD4-positive helper T cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m CD8-positive, alpha-beta memory T cell, CD45RO-positive consists of a  
         single batch or is too small. Skip.                                    
[34mINFO    [0m T cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m alpha-beta T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m alveolar type [1;36m1[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m alveolar type [1;36m2[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m animal cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m blood vessel endothelial cell consists of a single batch or is too     
         small. Skip.                                                           
[34mINFO    [0m chondrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m ciliated cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m ciliated columnar cell of tracheobronchial tree consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell, human consists of a single batch or is too small. Skip.
[34mINFO    [0m effector CD4-positive, alpha-beta T cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m effector memory CD8-positive, alpha-beta T cell, terminally            
         differentiated consists of a single batch or is too small. Skip.       
[34mINFO    [0m elicited macrophage consists of a single batch or is too small. Skip.  
[34mINFO    [0m epithelial cell of lower respiratory tract consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m goblet cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m intermediate monocyte consists of a single batch or is too small. Skip.
[34mINFO    [0m lung macrophage consists of a single batch or is too small. Skip.      
[34mINFO    [0m lung microvascular endothelial cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m lung neuroendocrine cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m lung pericyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m mature NK T cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mature alpha-beta T cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m mesothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mesothelial fibroblast consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mucus secreting cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid leukocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m myofibroblast cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m naive B cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m naive thymus-derived CD4-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m naive thymus-derived CD8-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m plasmacytoid dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m pulmonary artery endothelial cell consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m pulmonary interstitial fibroblast consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m squamous epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m stromal cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m tracheobronchial smooth muscle cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m vascular associated smooth muscle cell consists of a single batch or is
         too small. Skip.                                                       

19:53:41 Leiden sweep: lung_scvi
    19:53:41 resolution=0.5
    19:53:41 resolution=1.0
    19:53:42 resolution=2.0
19:53:42 kNN sweep: lung_scvi
    19:53:42 k=15
[34mINFO    [0m CD16-negative, CD56-bright natural killer cell, human consists of a    
         single batch or is too small. Skip.                                    
[34mINFO    [0m CD16-positive, CD56-dim natural killer cell, human consists of a single
         batch or is too small. Skip.                                           
[34mINFO    [0m CD4-positive helper T cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m CD8-positive, alpha-beta memory T cell, CD45RO-positive consists of a  
         single batch or is too small. Skip.                                    
[34mINFO    [0m T cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m alpha-beta T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m alveolar type [1;36m1[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m alveolar type [1;36m2[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m animal cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m blood vessel endothelial cell consists of a single batch or is too     
         small. Skip.                                                           
[34mINFO    [0m chondrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m ciliated cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m ciliated columnar cell of tracheobronchial tree consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell, human consists of a single batch or is too small. Skip.
[34mINFO    [0m effector CD4-positive, alpha-beta T cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m effector memory CD8-positive, alpha-beta T cell, terminally            
         differentiated consists of a single batch or is too small. Skip.       
[34mINFO    [0m elicited macrophage consists of a single batch or is too small. Skip.  
[34mINFO    [0m epithelial cell of lower respiratory tract consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m goblet cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m intermediate monocyte consists of a single batch or is too small. Skip.
[34mINFO    [0m lung macrophage consists of a single batch or is too small. Skip.      
[34mINFO    [0m lung microvascular endothelial cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m lung neuroendocrine cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m lung pericyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m mature NK T cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mature alpha-beta T cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m mesothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mesothelial fibroblast consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mucus secreting cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid leukocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m myofibroblast cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m naive B cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m naive thymus-derived CD4-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m naive thymus-derived CD8-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m plasmacytoid dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m pulmonary artery endothelial cell consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m pulmonary interstitial fibroblast consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m squamous epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m stromal cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m tracheobronchial smooth muscle cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m vascular associated smooth muscle cell consists of a single batch or is
         too small. Skip.                                                       
    19:53:48 k=30
[34mINFO    [0m CD16-negative, CD56-bright natural killer cell, human consists of a    
         single batch or is too small. Skip.                                    
[34mINFO    [0m CD16-positive, CD56-dim natural killer cell, human consists of a single
         batch or is too small. Skip.                                           
[34mINFO    [0m CD4-positive helper T cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m CD8-positive, alpha-beta memory T cell, CD45RO-positive consists of a  
         single batch or is too small. Skip.                                    
[34mINFO    [0m T cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m alpha-beta T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m alveolar type [1;36m1[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m alveolar type [1;36m2[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m animal cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m blood vessel endothelial cell consists of a single batch or is too     
         small. Skip.                                                           
[34mINFO    [0m chondrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m ciliated cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m ciliated columnar cell of tracheobronchial tree consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell, human consists of a single batch or is too small. Skip.
[34mINFO    [0m effector CD4-positive, alpha-beta T cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m effector memory CD8-positive, alpha-beta T cell, terminally            
         differentiated consists of a single batch or is too small. Skip.       
[34mINFO    [0m elicited macrophage consists of a single batch or is too small. Skip.  
[34mINFO    [0m epithelial cell of lower respiratory tract consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m goblet cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m intermediate monocyte consists of a single batch or is too small. Skip.
[34mINFO    [0m lung macrophage consists of a single batch or is too small. Skip.      
[34mINFO    [0m lung microvascular endothelial cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m lung neuroendocrine cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m lung pericyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m mature NK T cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mature alpha-beta T cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m mesothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mesothelial fibroblast consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mucus secreting cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid leukocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m myofibroblast cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m naive B cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m naive thymus-derived CD4-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m naive thymus-derived CD8-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m plasmacytoid dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m pulmonary artery endothelial cell consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m pulmonary interstitial fibroblast consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m squamous epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m stromal cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m tracheobronchial smooth muscle cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m vascular associated smooth muscle cell consists of a single batch or is
         too small. Skip.                                                       
    19:53:53 k=90
[34mINFO    [0m CD16-negative, CD56-bright natural killer cell, human consists of a    
         single batch or is too small. Skip.                                    
[34mINFO    [0m CD16-positive, CD56-dim natural killer cell, human consists of a single
         batch or is too small. Skip.                                           
[34mINFO    [0m CD4-positive helper T cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m CD8-positive, alpha-beta memory T cell, CD45RO-positive consists of a  
         single batch or is too small. Skip.                                    
[34mINFO    [0m T cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m alpha-beta T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m alveolar type [1;36m1[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m alveolar type [1;36m2[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m animal cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m blood vessel endothelial cell consists of a single batch or is too     
         small. Skip.                                                           
[34mINFO    [0m chondrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m ciliated cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m ciliated columnar cell of tracheobronchial tree consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell, human consists of a single batch or is too small. Skip.
[34mINFO    [0m effector CD4-positive, alpha-beta T cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m effector memory CD8-positive, alpha-beta T cell, terminally            
         differentiated consists of a single batch or is too small. Skip.       
[34mINFO    [0m elicited macrophage consists of a single batch or is too small. Skip.  
[34mINFO    [0m epithelial cell of lower respiratory tract consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m goblet cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m intermediate monocyte consists of a single batch or is too small. Skip.
[34mINFO    [0m lung macrophage consists of a single batch or is too small. Skip.      
[34mINFO    [0m lung microvascular endothelial cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m lung neuroendocrine cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m lung pericyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m mature NK T cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mature alpha-beta T cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m mesothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mesothelial fibroblast consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mucus secreting cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid leukocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m myofibroblast cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m naive B cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m naive thymus-derived CD4-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m naive thymus-derived CD8-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m plasmacytoid dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m pulmonary artery endothelial cell consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m pulmonary interstitial fibroblast consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m squamous epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m stromal cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m tracheobronchial smooth muscle cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m vascular associated smooth muscle cell consists of a single batch or is
         too small. Skip.                                                       

19:54:00 Leiden sweep: lung_scgpt
    19:54:01 resolution=0.5
    19:54:01 resolution=1.0
    19:54:01 resolution=2.0
19:54:01 kNN sweep: lung_scgpt
    19:54:01 k=15
[34mINFO    [0m CD16-negative, CD56-bright natural killer cell, human consists of a    
         single batch or is too small. Skip.                                    
[34mINFO    [0m CD16-positive, CD56-dim natural killer cell, human consists of a single
         batch or is too small. Skip.                                           
[34mINFO    [0m CD4-positive helper T cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m CD8-positive, alpha-beta memory T cell, CD45RO-positive consists of a  
         single batch or is too small. Skip.                                    
[34mINFO    [0m T cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m alpha-beta T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m alveolar type [1;36m1[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m alveolar type [1;36m2[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m animal cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m blood vessel endothelial cell consists of a single batch or is too     
         small. Skip.                                                           
[34mINFO    [0m chondrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m ciliated cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m ciliated columnar cell of tracheobronchial tree consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell, human consists of a single batch or is too small. Skip.
[34mINFO    [0m effector CD4-positive, alpha-beta T cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m effector memory CD8-positive, alpha-beta T cell, terminally            
         differentiated consists of a single batch or is too small. Skip.       
[34mINFO    [0m elicited macrophage consists of a single batch or is too small. Skip.  
[34mINFO    [0m epithelial cell of lower respiratory tract consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m goblet cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m intermediate monocyte consists of a single batch or is too small. Skip.
[34mINFO    [0m lung macrophage consists of a single batch or is too small. Skip.      
[34mINFO    [0m lung microvascular endothelial cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m lung neuroendocrine cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m lung pericyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m mature NK T cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mature alpha-beta T cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m mesothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mesothelial fibroblast consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mucus secreting cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid leukocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m myofibroblast cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m naive B cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m naive thymus-derived CD4-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m naive thymus-derived CD8-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m plasmacytoid dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m pulmonary artery endothelial cell consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m pulmonary interstitial fibroblast consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m squamous epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m stromal cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m tracheobronchial smooth muscle cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m vascular associated smooth muscle cell consists of a single batch or is
         too small. Skip.                                                       
    19:54:07 k=30
[34mINFO    [0m CD16-negative, CD56-bright natural killer cell, human consists of a    
         single batch or is too small. Skip.                                    
[34mINFO    [0m CD16-positive, CD56-dim natural killer cell, human consists of a single
         batch or is too small. Skip.                                           
[34mINFO    [0m CD4-positive helper T cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m CD8-positive, alpha-beta memory T cell, CD45RO-positive consists of a  
         single batch or is too small. Skip.                                    
[34mINFO    [0m T cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m alpha-beta T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m alveolar type [1;36m1[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m alveolar type [1;36m2[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m animal cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m blood vessel endothelial cell consists of a single batch or is too     
         small. Skip.                                                           
[34mINFO    [0m chondrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m ciliated cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m ciliated columnar cell of tracheobronchial tree consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell, human consists of a single batch or is too small. Skip.
[34mINFO    [0m effector CD4-positive, alpha-beta T cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m effector memory CD8-positive, alpha-beta T cell, terminally            
         differentiated consists of a single batch or is too small. Skip.       
[34mINFO    [0m elicited macrophage consists of a single batch or is too small. Skip.  
[34mINFO    [0m epithelial cell of lower respiratory tract consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m goblet cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m intermediate monocyte consists of a single batch or is too small. Skip.
[34mINFO    [0m lung macrophage consists of a single batch or is too small. Skip.      
[34mINFO    [0m lung microvascular endothelial cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m lung neuroendocrine cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m lung pericyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m mature NK T cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mature alpha-beta T cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m mesothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mesothelial fibroblast consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mucus secreting cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid leukocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m myofibroblast cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m naive B cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m naive thymus-derived CD4-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m naive thymus-derived CD8-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m plasmacytoid dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m pulmonary artery endothelial cell consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m pulmonary interstitial fibroblast consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m squamous epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m stromal cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m tracheobronchial smooth muscle cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m vascular associated smooth muscle cell consists of a single batch or is
         too small. Skip.                                                       
    19:54:11 k=90
[34mINFO    [0m CD16-negative, CD56-bright natural killer cell, human consists of a    
         single batch or is too small. Skip.                                    
[34mINFO    [0m CD16-positive, CD56-dim natural killer cell, human consists of a single
         batch or is too small. Skip.                                           
[34mINFO    [0m CD4-positive helper T cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m CD8-positive, alpha-beta memory T cell, CD45RO-positive consists of a  
         single batch or is too small. Skip.                                    
[34mINFO    [0m T cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m alpha-beta T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m alveolar type [1;36m1[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m alveolar type [1;36m2[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m animal cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m blood vessel endothelial cell consists of a single batch or is too     
         small. Skip.                                                           
[34mINFO    [0m chondrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m ciliated cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m ciliated columnar cell of tracheobronchial tree consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell, human consists of a single batch or is too small. Skip.
[34mINFO    [0m effector CD4-positive, alpha-beta T cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m effector memory CD8-positive, alpha-beta T cell, terminally            
         differentiated consists of a single batch or is too small. Skip.       
[34mINFO    [0m elicited macrophage consists of a single batch or is too small. Skip.  
[34mINFO    [0m epithelial cell of lower respiratory tract consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m goblet cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m intermediate monocyte consists of a single batch or is too small. Skip.
[34mINFO    [0m lung macrophage consists of a single batch or is too small. Skip.      
[34mINFO    [0m lung microvascular endothelial cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m lung neuroendocrine cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m lung pericyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m mature NK T cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mature alpha-beta T cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m mesothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mesothelial fibroblast consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mucus secreting cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid leukocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m myofibroblast cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m naive B cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m naive thymus-derived CD4-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m naive thymus-derived CD8-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m plasmacytoid dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m pulmonary artery endothelial cell consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m pulmonary interstitial fibroblast consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m squamous epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m stromal cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m tracheobronchial smooth muscle cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m vascular associated smooth muscle cell consists of a single batch or is
         too small. Skip.                                                       

19:54:19 Leiden sweep: lung_random_projection
    19:54:19 resolution=0.5
    19:54:19 resolution=1.0
    19:54:19 resolution=2.0
19:54:19 kNN sweep: lung_random_projection
    19:54:19 k=15
[34mINFO    [0m CD16-negative, CD56-bright natural killer cell, human consists of a    
         single batch or is too small. Skip.                                    
[34mINFO    [0m CD16-positive, CD56-dim natural killer cell, human consists of a single
         batch or is too small. Skip.                                           
[34mINFO    [0m CD4-positive helper T cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m CD8-positive, alpha-beta memory T cell, CD45RO-positive consists of a  
         single batch or is too small. Skip.                                    
[34mINFO    [0m T cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m alpha-beta T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m alveolar type [1;36m1[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m alveolar type [1;36m2[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m animal cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m blood vessel endothelial cell consists of a single batch or is too     
         small. Skip.                                                           
[34mINFO    [0m chondrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m ciliated cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m ciliated columnar cell of tracheobronchial tree consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell, human consists of a single batch or is too small. Skip.
[34mINFO    [0m effector CD4-positive, alpha-beta T cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m effector memory CD8-positive, alpha-beta T cell, terminally            
         differentiated consists of a single batch or is too small. Skip.       
[34mINFO    [0m elicited macrophage consists of a single batch or is too small. Skip.  
[34mINFO    [0m epithelial cell of lower respiratory tract consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m goblet cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m intermediate monocyte consists of a single batch or is too small. Skip.
[34mINFO    [0m lung macrophage consists of a single batch or is too small. Skip.      
[34mINFO    [0m lung microvascular endothelial cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m lung neuroendocrine cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m lung pericyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m mature NK T cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mature alpha-beta T cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m mesothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mesothelial fibroblast consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mucus secreting cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid leukocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m myofibroblast cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m naive B cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m naive thymus-derived CD4-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m naive thymus-derived CD8-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m plasmacytoid dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m pulmonary artery endothelial cell consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m pulmonary interstitial fibroblast consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m squamous epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m stromal cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m tracheobronchial smooth muscle cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m vascular associated smooth muscle cell consists of a single batch or is
         too small. Skip.                                                       
    19:54:24 k=30
[34mINFO    [0m CD16-negative, CD56-bright natural killer cell, human consists of a    
         single batch or is too small. Skip.                                    
[34mINFO    [0m CD16-positive, CD56-dim natural killer cell, human consists of a single
         batch or is too small. Skip.                                           
[34mINFO    [0m CD4-positive helper T cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m CD8-positive, alpha-beta memory T cell, CD45RO-positive consists of a  
         single batch or is too small. Skip.                                    
[34mINFO    [0m T cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m alpha-beta T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m alveolar type [1;36m1[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m alveolar type [1;36m2[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m animal cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m blood vessel endothelial cell consists of a single batch or is too     
         small. Skip.                                                           
[34mINFO    [0m chondrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m ciliated cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m ciliated columnar cell of tracheobronchial tree consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell, human consists of a single batch or is too small. Skip.
[34mINFO    [0m effector CD4-positive, alpha-beta T cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m effector memory CD8-positive, alpha-beta T cell, terminally            
         differentiated consists of a single batch or is too small. Skip.       
[34mINFO    [0m elicited macrophage consists of a single batch or is too small. Skip.  
[34mINFO    [0m epithelial cell of lower respiratory tract consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m goblet cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m intermediate monocyte consists of a single batch or is too small. Skip.
[34mINFO    [0m lung macrophage consists of a single batch or is too small. Skip.      
[34mINFO    [0m lung microvascular endothelial cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m lung neuroendocrine cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m lung pericyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m mature NK T cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mature alpha-beta T cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m mesothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mesothelial fibroblast consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mucus secreting cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid leukocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m myofibroblast cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m naive B cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m naive thymus-derived CD4-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m naive thymus-derived CD8-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m plasmacytoid dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m pulmonary artery endothelial cell consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m pulmonary interstitial fibroblast consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m squamous epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m stromal cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m tracheobronchial smooth muscle cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m vascular associated smooth muscle cell consists of a single batch or is
         too small. Skip.                                                       
    19:54:31 k=90
[34mINFO    [0m CD16-negative, CD56-bright natural killer cell, human consists of a    
         single batch or is too small. Skip.                                    
[34mINFO    [0m CD16-positive, CD56-dim natural killer cell, human consists of a single
         batch or is too small. Skip.                                           
[34mINFO    [0m CD4-positive helper T cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m CD8-positive, alpha-beta memory T cell, CD45RO-positive consists of a  
         single batch or is too small. Skip.                                    
[34mINFO    [0m T cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m alpha-beta T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m alveolar type [1;36m1[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m alveolar type [1;36m2[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m animal cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m blood vessel endothelial cell consists of a single batch or is too     
         small. Skip.                                                           
[34mINFO    [0m chondrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m ciliated cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m ciliated columnar cell of tracheobronchial tree consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell, human consists of a single batch or is too small. Skip.
[34mINFO    [0m effector CD4-positive, alpha-beta T cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m effector memory CD8-positive, alpha-beta T cell, terminally            
         differentiated consists of a single batch or is too small. Skip.       
[34mINFO    [0m elicited macrophage consists of a single batch or is too small. Skip.  
[34mINFO    [0m epithelial cell of lower respiratory tract consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m goblet cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m intermediate monocyte consists of a single batch or is too small. Skip.
[34mINFO    [0m lung macrophage consists of a single batch or is too small. Skip.      
[34mINFO    [0m lung microvascular endothelial cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m lung neuroendocrine cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m lung pericyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m mature NK T cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mature alpha-beta T cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m mesothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mesothelial fibroblast consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mucus secreting cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid leukocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m myofibroblast cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m naive B cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m naive thymus-derived CD4-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m naive thymus-derived CD8-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m plasmacytoid dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m pulmonary artery endothelial cell consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m pulmonary interstitial fibroblast consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m squamous epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m stromal cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m tracheobronchial smooth muscle cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m vascular associated smooth muscle cell consists of a single batch or is
         too small. Skip.                                                       

19:54:41 Leiden sweep: lung_untrained_encoder
    19:54:41 resolution=0.5
    19:54:41 resolution=1.0
    19:54:41 resolution=2.0
19:54:42 kNN sweep: lung_untrained_encoder
    19:54:42 k=15
[34mINFO    [0m CD16-negative, CD56-bright natural killer cell, human consists of a    
         single batch or is too small. Skip.                                    
[34mINFO    [0m CD16-positive, CD56-dim natural killer cell, human consists of a single
         batch or is too small. Skip.                                           
[34mINFO    [0m CD4-positive helper T cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m CD8-positive, alpha-beta memory T cell, CD45RO-positive consists of a  
         single batch or is too small. Skip.                                    
[34mINFO    [0m T cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m alpha-beta T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m alveolar type [1;36m1[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m alveolar type [1;36m2[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m animal cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m blood vessel endothelial cell consists of a single batch or is too     
         small. Skip.                                                           
[34mINFO    [0m chondrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m ciliated cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m ciliated columnar cell of tracheobronchial tree consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell, human consists of a single batch or is too small. Skip.
[34mINFO    [0m effector CD4-positive, alpha-beta T cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m effector memory CD8-positive, alpha-beta T cell, terminally            
         differentiated consists of a single batch or is too small. Skip.       
[34mINFO    [0m elicited macrophage consists of a single batch or is too small. Skip.  
[34mINFO    [0m epithelial cell of lower respiratory tract consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m goblet cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m intermediate monocyte consists of a single batch or is too small. Skip.
[34mINFO    [0m lung macrophage consists of a single batch or is too small. Skip.      
[34mINFO    [0m lung microvascular endothelial cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m lung neuroendocrine cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m lung pericyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m mature NK T cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mature alpha-beta T cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m mesothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mesothelial fibroblast consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mucus secreting cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid leukocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m myofibroblast cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m naive B cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m naive thymus-derived CD4-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m naive thymus-derived CD8-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m plasmacytoid dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m pulmonary artery endothelial cell consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m pulmonary interstitial fibroblast consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m squamous epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m stromal cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m tracheobronchial smooth muscle cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m vascular associated smooth muscle cell consists of a single batch or is
         too small. Skip.                                                       
    19:54:46 k=30
[34mINFO    [0m CD16-negative, CD56-bright natural killer cell, human consists of a    
         single batch or is too small. Skip.                                    
[34mINFO    [0m CD16-positive, CD56-dim natural killer cell, human consists of a single
         batch or is too small. Skip.                                           
[34mINFO    [0m CD4-positive helper T cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m CD8-positive, alpha-beta memory T cell, CD45RO-positive consists of a  
         single batch or is too small. Skip.                                    
[34mINFO    [0m T cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m alpha-beta T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m alveolar type [1;36m1[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m alveolar type [1;36m2[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m animal cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m blood vessel endothelial cell consists of a single batch or is too     
         small. Skip.                                                           
[34mINFO    [0m chondrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m ciliated cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m ciliated columnar cell of tracheobronchial tree consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell, human consists of a single batch or is too small. Skip.
[34mINFO    [0m effector CD4-positive, alpha-beta T cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m effector memory CD8-positive, alpha-beta T cell, terminally            
         differentiated consists of a single batch or is too small. Skip.       
[34mINFO    [0m elicited macrophage consists of a single batch or is too small. Skip.  
[34mINFO    [0m epithelial cell of lower respiratory tract consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m goblet cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m intermediate monocyte consists of a single batch or is too small. Skip.
[34mINFO    [0m lung macrophage consists of a single batch or is too small. Skip.      
[34mINFO    [0m lung microvascular endothelial cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m lung neuroendocrine cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m lung pericyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m mature NK T cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mature alpha-beta T cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m mesothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mesothelial fibroblast consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mucus secreting cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid leukocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m myofibroblast cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m naive B cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m naive thymus-derived CD4-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m naive thymus-derived CD8-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m plasmacytoid dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m pulmonary artery endothelial cell consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m pulmonary interstitial fibroblast consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m squamous epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m stromal cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m tracheobronchial smooth muscle cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m vascular associated smooth muscle cell consists of a single batch or is
         too small. Skip.                                                       
    19:54:52 k=90
[34mINFO    [0m CD16-negative, CD56-bright natural killer cell, human consists of a    
         single batch or is too small. Skip.                                    
[34mINFO    [0m CD16-positive, CD56-dim natural killer cell, human consists of a single
         batch or is too small. Skip.                                           
[34mINFO    [0m CD4-positive helper T cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m CD8-positive, alpha-beta memory T cell, CD45RO-positive consists of a  
         single batch or is too small. Skip.                                    
[34mINFO    [0m T cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m alpha-beta T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m alveolar type [1;36m1[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m alveolar type [1;36m2[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m animal cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m blood vessel endothelial cell consists of a single batch or is too     
         small. Skip.                                                           
[34mINFO    [0m chondrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m ciliated cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m ciliated columnar cell of tracheobronchial tree consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell, human consists of a single batch or is too small. Skip.
[34mINFO    [0m effector CD4-positive, alpha-beta T cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m effector memory CD8-positive, alpha-beta T cell, terminally            
         differentiated consists of a single batch or is too small. Skip.       
[34mINFO    [0m elicited macrophage consists of a single batch or is too small. Skip.  
[34mINFO    [0m epithelial cell of lower respiratory tract consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m goblet cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m intermediate monocyte consists of a single batch or is too small. Skip.
[34mINFO    [0m lung macrophage consists of a single batch or is too small. Skip.      
[34mINFO    [0m lung microvascular endothelial cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m lung neuroendocrine cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m lung pericyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m mature NK T cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mature alpha-beta T cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m mesothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mesothelial fibroblast consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mucus secreting cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid leukocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m myofibroblast cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m naive B cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m naive thymus-derived CD4-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m naive thymus-derived CD8-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m plasmacytoid dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m pulmonary artery endothelial cell consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m pulmonary interstitial fibroblast consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m squamous epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m stromal cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m tracheobronchial smooth muscle cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m vascular associated smooth muscle cell consists of a single batch or is
         too small. Skip.                                                       

19:55:01 Leiden sweep: lung_bog_pca_512
    19:55:02 resolution=0.5
    19:55:02 resolution=1.0
    19:55:02 resolution=2.0
19:55:02 kNN sweep: lung_bog_pca_512
    19:55:02 k=15
[34mINFO    [0m CD16-negative, CD56-bright natural killer cell, human consists of a    
         single batch or is too small. Skip.                                    
[34mINFO    [0m CD16-positive, CD56-dim natural killer cell, human consists of a single
         batch or is too small. Skip.                                           
[34mINFO    [0m CD4-positive helper T cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m CD8-positive, alpha-beta memory T cell, CD45RO-positive consists of a  
         single batch or is too small. Skip.                                    
[34mINFO    [0m T cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m alpha-beta T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m alveolar type [1;36m1[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m alveolar type [1;36m2[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m animal cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m blood vessel endothelial cell consists of a single batch or is too     
         small. Skip.                                                           
[34mINFO    [0m chondrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m ciliated cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m ciliated columnar cell of tracheobronchial tree consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell, human consists of a single batch or is too small. Skip.
[34mINFO    [0m effector CD4-positive, alpha-beta T cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m effector memory CD8-positive, alpha-beta T cell, terminally            
         differentiated consists of a single batch or is too small. Skip.       
[34mINFO    [0m elicited macrophage consists of a single batch or is too small. Skip.  
[34mINFO    [0m epithelial cell of lower respiratory tract consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m goblet cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m intermediate monocyte consists of a single batch or is too small. Skip.
[34mINFO    [0m lung macrophage consists of a single batch or is too small. Skip.      
[34mINFO    [0m lung microvascular endothelial cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m lung neuroendocrine cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m lung pericyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m mature NK T cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mature alpha-beta T cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m mesothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mesothelial fibroblast consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mucus secreting cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid leukocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m myofibroblast cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m naive B cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m naive thymus-derived CD4-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m naive thymus-derived CD8-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m plasmacytoid dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m pulmonary artery endothelial cell consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m pulmonary interstitial fibroblast consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m squamous epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m stromal cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m tracheobronchial smooth muscle cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m vascular associated smooth muscle cell consists of a single batch or is
         too small. Skip.                                                       
    19:55:08 k=30
[34mINFO    [0m CD16-negative, CD56-bright natural killer cell, human consists of a    
         single batch or is too small. Skip.                                    
[34mINFO    [0m CD16-positive, CD56-dim natural killer cell, human consists of a single
         batch or is too small. Skip.                                           
[34mINFO    [0m CD4-positive helper T cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m CD8-positive, alpha-beta memory T cell, CD45RO-positive consists of a  
         single batch or is too small. Skip.                                    
[34mINFO    [0m T cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m alpha-beta T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m alveolar type [1;36m1[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m alveolar type [1;36m2[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m animal cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m blood vessel endothelial cell consists of a single batch or is too     
         small. Skip.                                                           
[34mINFO    [0m chondrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m ciliated cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m ciliated columnar cell of tracheobronchial tree consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell, human consists of a single batch or is too small. Skip.
[34mINFO    [0m effector CD4-positive, alpha-beta T cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m effector memory CD8-positive, alpha-beta T cell, terminally            
         differentiated consists of a single batch or is too small. Skip.       
[34mINFO    [0m elicited macrophage consists of a single batch or is too small. Skip.  
[34mINFO    [0m epithelial cell of lower respiratory tract consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m goblet cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m intermediate monocyte consists of a single batch or is too small. Skip.
[34mINFO    [0m lung macrophage consists of a single batch or is too small. Skip.      
[34mINFO    [0m lung microvascular endothelial cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m lung neuroendocrine cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m lung pericyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m mature NK T cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mature alpha-beta T cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m mesothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mesothelial fibroblast consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mucus secreting cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid leukocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m myofibroblast cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m naive B cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m naive thymus-derived CD4-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m naive thymus-derived CD8-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m plasmacytoid dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m pulmonary artery endothelial cell consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m pulmonary interstitial fibroblast consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m squamous epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m stromal cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m tracheobronchial smooth muscle cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m vascular associated smooth muscle cell consists of a single batch or is
         too small. Skip.                                                       
    19:55:14 k=90
[34mINFO    [0m CD16-negative, CD56-bright natural killer cell, human consists of a    
         single batch or is too small. Skip.                                    
[34mINFO    [0m CD16-positive, CD56-dim natural killer cell, human consists of a single
         batch or is too small. Skip.                                           
[34mINFO    [0m CD4-positive helper T cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m CD8-positive, alpha-beta memory T cell, CD45RO-positive consists of a  
         single batch or is too small. Skip.                                    
[34mINFO    [0m T cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m alpha-beta T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m alveolar type [1;36m1[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m alveolar type [1;36m2[0m fibroblast cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m animal cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m blood vessel endothelial cell consists of a single batch or is too     
         small. Skip.                                                           
[34mINFO    [0m chondrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m ciliated cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m ciliated columnar cell of tracheobronchial tree consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell, human consists of a single batch or is too small. Skip.
[34mINFO    [0m effector CD4-positive, alpha-beta T cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m effector memory CD8-positive, alpha-beta T cell, terminally            
         differentiated consists of a single batch or is too small. Skip.       
[34mINFO    [0m elicited macrophage consists of a single batch or is too small. Skip.  
[34mINFO    [0m epithelial cell of lower respiratory tract consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m goblet cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m intermediate monocyte consists of a single batch or is too small. Skip.
[34mINFO    [0m lung macrophage consists of a single batch or is too small. Skip.      
[34mINFO    [0m lung microvascular endothelial cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m lung neuroendocrine cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m lung pericyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m mature NK T cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mature alpha-beta T cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m mesothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m mesothelial fibroblast consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mucus secreting cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid leukocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m myofibroblast cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m naive B cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m naive thymus-derived CD4-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m naive thymus-derived CD8-positive, alpha-beta T cell consists of a     
         single batch or is too small. Skip.                                    
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m plasmacytoid dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m pulmonary artery endothelial cell consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m pulmonary interstitial fibroblast consists of a single batch or is too 
         small. Skip.                                                           
[34mINFO    [0m squamous epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m stromal cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m tracheobronchial smooth muscle cell consists of a single batch or is   
         too small. Skip.                                                       
[34mINFO    [0m vascular associated smooth muscle cell consists of a single batch or is
         too small. Skip.                                                       

============================================================
19:55:21 Processing tissue: liver
19:55:21 Pulling source cells...
  Source: 2000 cells
19:56:39 Pulling target cells...
  Target: 2000 cells

19:59:29 Leiden sweep: liver_geneformer
    19:59:30 resolution=0.5
    19:59:30 resolution=1.0
    19:59:30 resolution=2.0
19:59:30 kNN sweep: liver_geneformer
    19:59:30 k=15
[34mINFO    [0m CD1c-positive myeloid dendritic cell consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m CD4-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m Kupffer cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m capillary endothelial cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m cholangiocyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m classical monocyte consists of a single batch or is too small. Skip.   
[34mINFO    [0m common dendritic progenitor consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m common lymphoid progenitor consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m endothelial cell of lymphatic vessel consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m epithelial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m erythroblast consists of a single batch or is too small. Skip.         
[34mINFO    [0m erythrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m erythroid progenitor cell consists of a single batch or is too small.  
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m granulocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m hematopoietic multipotent progenitor cell consists of a single batch or
         is too small. Skip.                                                    
[34mINFO    [0m hepatic stellate cell consists of a single batch or is too small. Skip.
[34mINFO    [0m intrahepatic cholangiocyte consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m liver dendritic cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m lymphoid lineage restricted progenitor cell consists of a single batch 
         or is too small. Skip.                                                 
[34mINFO    [0m malignant cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m megakaryocyte-erythroid progenitor cell consists of a single batch or  
         is too small. Skip.                                                    
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid lineage restricted progenitor cell consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m neoplastic cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m non-classical monocyte consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m precursor B cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m pro-B cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m proerythroblast consists of a single batch or is too small. Skip.      
[34mINFO    [0m regulatory T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m type I pneumocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    19:59:36 k=30
[34mINFO    [0m CD1c-positive myeloid dendritic cell consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m CD4-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m Kupffer cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m capillary endothelial cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m cholangiocyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m classical monocyte consists of a single batch or is too small. Skip.   
[34mINFO    [0m common dendritic progenitor consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m common lymphoid progenitor consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m endothelial cell of lymphatic vessel consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m epithelial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m erythroblast consists of a single batch or is too small. Skip.         
[34mINFO    [0m erythrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m erythroid progenitor cell consists of a single batch or is too small.  
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m granulocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m hematopoietic multipotent progenitor cell consists of a single batch or
         is too small. Skip.                                                    
[34mINFO    [0m hepatic stellate cell consists of a single batch or is too small. Skip.
[34mINFO    [0m intrahepatic cholangiocyte consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m liver dendritic cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m lymphoid lineage restricted progenitor cell consists of a single batch 
         or is too small. Skip.                                                 
[34mINFO    [0m malignant cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m megakaryocyte-erythroid progenitor cell consists of a single batch or  
         is too small. Skip.                                                    
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid lineage restricted progenitor cell consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m neoplastic cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m non-classical monocyte consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m precursor B cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m pro-B cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m proerythroblast consists of a single batch or is too small. Skip.      
[34mINFO    [0m regulatory T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m type I pneumocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    19:59:40 k=90
[34mINFO    [0m CD1c-positive myeloid dendritic cell consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m CD4-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m Kupffer cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m capillary endothelial cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m cholangiocyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m classical monocyte consists of a single batch or is too small. Skip.   
[34mINFO    [0m common dendritic progenitor consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m common lymphoid progenitor consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m endothelial cell of lymphatic vessel consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m epithelial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m erythroblast consists of a single batch or is too small. Skip.         
[34mINFO    [0m erythrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m erythroid progenitor cell consists of a single batch or is too small.  
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m granulocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m hematopoietic multipotent progenitor cell consists of a single batch or
         is too small. Skip.                                                    
[34mINFO    [0m hepatic stellate cell consists of a single batch or is too small. Skip.
[34mINFO    [0m intrahepatic cholangiocyte consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m liver dendritic cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m lymphoid lineage restricted progenitor cell consists of a single batch 
         or is too small. Skip.                                                 
[34mINFO    [0m malignant cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m megakaryocyte-erythroid progenitor cell consists of a single batch or  
         is too small. Skip.                                                    
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid lineage restricted progenitor cell consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m neoplastic cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m non-classical monocyte consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m precursor B cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m pro-B cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m proerythroblast consists of a single batch or is too small. Skip.      
[34mINFO    [0m regulatory T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m type I pneumocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.

19:59:48 Leiden sweep: liver_scvi
    19:59:49 resolution=0.5
    19:59:49 resolution=1.0
    19:59:49 resolution=2.0
19:59:49 kNN sweep: liver_scvi
    19:59:49 k=15
[34mINFO    [0m CD1c-positive myeloid dendritic cell consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m CD4-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m Kupffer cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m capillary endothelial cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m cholangiocyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m classical monocyte consists of a single batch or is too small. Skip.   
[34mINFO    [0m common dendritic progenitor consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m common lymphoid progenitor consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m endothelial cell of lymphatic vessel consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m epithelial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m erythroblast consists of a single batch or is too small. Skip.         
[34mINFO    [0m erythrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m erythroid progenitor cell consists of a single batch or is too small.  
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m granulocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m hematopoietic multipotent progenitor cell consists of a single batch or
         is too small. Skip.                                                    
[34mINFO    [0m hepatic stellate cell consists of a single batch or is too small. Skip.
[34mINFO    [0m intrahepatic cholangiocyte consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m liver dendritic cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m lymphoid lineage restricted progenitor cell consists of a single batch 
         or is too small. Skip.                                                 
[34mINFO    [0m malignant cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m megakaryocyte-erythroid progenitor cell consists of a single batch or  
         is too small. Skip.                                                    
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid lineage restricted progenitor cell consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m neoplastic cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m non-classical monocyte consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m precursor B cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m pro-B cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m proerythroblast consists of a single batch or is too small. Skip.      
[34mINFO    [0m regulatory T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m type I pneumocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    19:59:53 k=30
[34mINFO    [0m CD1c-positive myeloid dendritic cell consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m CD4-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m Kupffer cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m capillary endothelial cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m cholangiocyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m classical monocyte consists of a single batch or is too small. Skip.   
[34mINFO    [0m common dendritic progenitor consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m common lymphoid progenitor consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m endothelial cell of lymphatic vessel consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m epithelial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m erythroblast consists of a single batch or is too small. Skip.         
[34mINFO    [0m erythrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m erythroid progenitor cell consists of a single batch or is too small.  
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m granulocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m hematopoietic multipotent progenitor cell consists of a single batch or
         is too small. Skip.                                                    
[34mINFO    [0m hepatic stellate cell consists of a single batch or is too small. Skip.
[34mINFO    [0m intrahepatic cholangiocyte consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m liver dendritic cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m lymphoid lineage restricted progenitor cell consists of a single batch 
         or is too small. Skip.                                                 
[34mINFO    [0m malignant cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m megakaryocyte-erythroid progenitor cell consists of a single batch or  
         is too small. Skip.                                                    
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid lineage restricted progenitor cell consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m neoplastic cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m non-classical monocyte consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m precursor B cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m pro-B cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m proerythroblast consists of a single batch or is too small. Skip.      
[34mINFO    [0m regulatory T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m type I pneumocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    19:59:55 k=90
[34mINFO    [0m CD1c-positive myeloid dendritic cell consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m CD4-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m Kupffer cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m capillary endothelial cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m cholangiocyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m classical monocyte consists of a single batch or is too small. Skip.   
[34mINFO    [0m common dendritic progenitor consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m common lymphoid progenitor consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m endothelial cell of lymphatic vessel consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m epithelial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m erythroblast consists of a single batch or is too small. Skip.         
[34mINFO    [0m erythrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m erythroid progenitor cell consists of a single batch or is too small.  
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m granulocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m hematopoietic multipotent progenitor cell consists of a single batch or
         is too small. Skip.                                                    
[34mINFO    [0m hepatic stellate cell consists of a single batch or is too small. Skip.
[34mINFO    [0m intrahepatic cholangiocyte consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m liver dendritic cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m lymphoid lineage restricted progenitor cell consists of a single batch 
         or is too small. Skip.                                                 
[34mINFO    [0m malignant cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m megakaryocyte-erythroid progenitor cell consists of a single batch or  
         is too small. Skip.                                                    
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid lineage restricted progenitor cell consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m neoplastic cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m non-classical monocyte consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m precursor B cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m pro-B cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m proerythroblast consists of a single batch or is too small. Skip.      
[34mINFO    [0m regulatory T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m type I pneumocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.

20:00:00 Leiden sweep: liver_scgpt
    20:00:01 resolution=0.5
    20:00:01 resolution=1.0
    20:00:01 resolution=2.0
20:00:01 kNN sweep: liver_scgpt
    20:00:01 k=15
[34mINFO    [0m CD1c-positive myeloid dendritic cell consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m CD4-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m Kupffer cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m capillary endothelial cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m cholangiocyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m classical monocyte consists of a single batch or is too small. Skip.   
[34mINFO    [0m common dendritic progenitor consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m common lymphoid progenitor consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m endothelial cell of lymphatic vessel consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m epithelial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m erythroblast consists of a single batch or is too small. Skip.         
[34mINFO    [0m erythrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m erythroid progenitor cell consists of a single batch or is too small.  
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m granulocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m hematopoietic multipotent progenitor cell consists of a single batch or
         is too small. Skip.                                                    
[34mINFO    [0m hepatic stellate cell consists of a single batch or is too small. Skip.
[34mINFO    [0m intrahepatic cholangiocyte consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m liver dendritic cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m lymphoid lineage restricted progenitor cell consists of a single batch 
         or is too small. Skip.                                                 
[34mINFO    [0m malignant cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m megakaryocyte-erythroid progenitor cell consists of a single batch or  
         is too small. Skip.                                                    
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid lineage restricted progenitor cell consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m neoplastic cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m non-classical monocyte consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m precursor B cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m pro-B cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m proerythroblast consists of a single batch or is too small. Skip.      
[34mINFO    [0m regulatory T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m type I pneumocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    20:00:05 k=30
[34mINFO    [0m CD1c-positive myeloid dendritic cell consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m CD4-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m Kupffer cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m capillary endothelial cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m cholangiocyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m classical monocyte consists of a single batch or is too small. Skip.   
[34mINFO    [0m common dendritic progenitor consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m common lymphoid progenitor consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m endothelial cell of lymphatic vessel consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m epithelial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m erythroblast consists of a single batch or is too small. Skip.         
[34mINFO    [0m erythrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m erythroid progenitor cell consists of a single batch or is too small.  
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m granulocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m hematopoietic multipotent progenitor cell consists of a single batch or
         is too small. Skip.                                                    
[34mINFO    [0m hepatic stellate cell consists of a single batch or is too small. Skip.
[34mINFO    [0m intrahepatic cholangiocyte consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m liver dendritic cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m lymphoid lineage restricted progenitor cell consists of a single batch 
         or is too small. Skip.                                                 
[34mINFO    [0m malignant cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m megakaryocyte-erythroid progenitor cell consists of a single batch or  
         is too small. Skip.                                                    
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid lineage restricted progenitor cell consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m neoplastic cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m non-classical monocyte consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m precursor B cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m pro-B cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m proerythroblast consists of a single batch or is too small. Skip.      
[34mINFO    [0m regulatory T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m type I pneumocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    20:00:09 k=90
[34mINFO    [0m CD1c-positive myeloid dendritic cell consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m CD4-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m Kupffer cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m capillary endothelial cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m cholangiocyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m classical monocyte consists of a single batch or is too small. Skip.   
[34mINFO    [0m common dendritic progenitor consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m common lymphoid progenitor consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m endothelial cell of lymphatic vessel consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m epithelial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m erythroblast consists of a single batch or is too small. Skip.         
[34mINFO    [0m erythrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m erythroid progenitor cell consists of a single batch or is too small.  
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m granulocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m hematopoietic multipotent progenitor cell consists of a single batch or
         is too small. Skip.                                                    
[34mINFO    [0m hepatic stellate cell consists of a single batch or is too small. Skip.
[34mINFO    [0m intrahepatic cholangiocyte consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m liver dendritic cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m lymphoid lineage restricted progenitor cell consists of a single batch 
         or is too small. Skip.                                                 
[34mINFO    [0m malignant cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m megakaryocyte-erythroid progenitor cell consists of a single batch or  
         is too small. Skip.                                                    
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid lineage restricted progenitor cell consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m neoplastic cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m non-classical monocyte consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m precursor B cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m pro-B cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m proerythroblast consists of a single batch or is too small. Skip.      
[34mINFO    [0m regulatory T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m type I pneumocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.

20:00:15 Leiden sweep: liver_random_projection
    20:00:15 resolution=0.5
    20:00:15 resolution=1.0
    20:00:16 resolution=2.0
20:00:16 kNN sweep: liver_random_projection
    20:00:16 k=15
[34mINFO    [0m CD1c-positive myeloid dendritic cell consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m CD4-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m Kupffer cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m capillary endothelial cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m cholangiocyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m classical monocyte consists of a single batch or is too small. Skip.   
[34mINFO    [0m common dendritic progenitor consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m common lymphoid progenitor consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m endothelial cell of lymphatic vessel consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m epithelial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m erythroblast consists of a single batch or is too small. Skip.         
[34mINFO    [0m erythrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m erythroid progenitor cell consists of a single batch or is too small.  
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m granulocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m hematopoietic multipotent progenitor cell consists of a single batch or
         is too small. Skip.                                                    
[34mINFO    [0m hepatic stellate cell consists of a single batch or is too small. Skip.
[34mINFO    [0m intrahepatic cholangiocyte consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m liver dendritic cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m lymphoid lineage restricted progenitor cell consists of a single batch 
         or is too small. Skip.                                                 
[34mINFO    [0m malignant cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m megakaryocyte-erythroid progenitor cell consists of a single batch or  
         is too small. Skip.                                                    
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid lineage restricted progenitor cell consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m neoplastic cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m non-classical monocyte consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m precursor B cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m pro-B cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m proerythroblast consists of a single batch or is too small. Skip.      
[34mINFO    [0m regulatory T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m type I pneumocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    20:00:19 k=30
[34mINFO    [0m CD1c-positive myeloid dendritic cell consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m CD4-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m Kupffer cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m capillary endothelial cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m cholangiocyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m classical monocyte consists of a single batch or is too small. Skip.   
[34mINFO    [0m common dendritic progenitor consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m common lymphoid progenitor consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m endothelial cell of lymphatic vessel consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m epithelial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m erythroblast consists of a single batch or is too small. Skip.         
[34mINFO    [0m erythrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m erythroid progenitor cell consists of a single batch or is too small.  
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m granulocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m hematopoietic multipotent progenitor cell consists of a single batch or
         is too small. Skip.                                                    
[34mINFO    [0m hepatic stellate cell consists of a single batch or is too small. Skip.
[34mINFO    [0m intrahepatic cholangiocyte consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m liver dendritic cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m lymphoid lineage restricted progenitor cell consists of a single batch 
         or is too small. Skip.                                                 
[34mINFO    [0m malignant cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m megakaryocyte-erythroid progenitor cell consists of a single batch or  
         is too small. Skip.                                                    
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid lineage restricted progenitor cell consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m neoplastic cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m non-classical monocyte consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m precursor B cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m pro-B cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m proerythroblast consists of a single batch or is too small. Skip.      
[34mINFO    [0m regulatory T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m type I pneumocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    20:00:24 k=90
[34mINFO    [0m CD1c-positive myeloid dendritic cell consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m CD4-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m Kupffer cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m capillary endothelial cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m cholangiocyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m classical monocyte consists of a single batch or is too small. Skip.   
[34mINFO    [0m common dendritic progenitor consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m common lymphoid progenitor consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m endothelial cell of lymphatic vessel consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m epithelial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m erythroblast consists of a single batch or is too small. Skip.         
[34mINFO    [0m erythrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m erythroid progenitor cell consists of a single batch or is too small.  
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m granulocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m hematopoietic multipotent progenitor cell consists of a single batch or
         is too small. Skip.                                                    
[34mINFO    [0m hepatic stellate cell consists of a single batch or is too small. Skip.
[34mINFO    [0m intrahepatic cholangiocyte consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m liver dendritic cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m lymphoid lineage restricted progenitor cell consists of a single batch 
         or is too small. Skip.                                                 
[34mINFO    [0m malignant cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m megakaryocyte-erythroid progenitor cell consists of a single batch or  
         is too small. Skip.                                                    
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid lineage restricted progenitor cell consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m neoplastic cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m non-classical monocyte consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m precursor B cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m pro-B cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m proerythroblast consists of a single batch or is too small. Skip.      
[34mINFO    [0m regulatory T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m type I pneumocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.

20:00:32 Leiden sweep: liver_untrained_encoder
    20:00:33 resolution=0.5
    20:00:33 resolution=1.0
    20:00:33 resolution=2.0
20:00:33 kNN sweep: liver_untrained_encoder
    20:00:33 k=15
[34mINFO    [0m CD1c-positive myeloid dendritic cell consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m CD4-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m Kupffer cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m capillary endothelial cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m cholangiocyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m classical monocyte consists of a single batch or is too small. Skip.   
[34mINFO    [0m common dendritic progenitor consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m common lymphoid progenitor consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m endothelial cell of lymphatic vessel consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m epithelial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m erythroblast consists of a single batch or is too small. Skip.         
[34mINFO    [0m erythrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m erythroid progenitor cell consists of a single batch or is too small.  
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m granulocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m hematopoietic multipotent progenitor cell consists of a single batch or
         is too small. Skip.                                                    
[34mINFO    [0m hepatic stellate cell consists of a single batch or is too small. Skip.
[34mINFO    [0m intrahepatic cholangiocyte consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m liver dendritic cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m lymphoid lineage restricted progenitor cell consists of a single batch 
         or is too small. Skip.                                                 
[34mINFO    [0m malignant cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m megakaryocyte-erythroid progenitor cell consists of a single batch or  
         is too small. Skip.                                                    
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid lineage restricted progenitor cell consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m neoplastic cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m non-classical monocyte consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m precursor B cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m pro-B cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m proerythroblast consists of a single batch or is too small. Skip.      
[34mINFO    [0m regulatory T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m type I pneumocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    20:00:36 k=30
[34mINFO    [0m CD1c-positive myeloid dendritic cell consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m CD4-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m Kupffer cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m capillary endothelial cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m cholangiocyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m classical monocyte consists of a single batch or is too small. Skip.   
[34mINFO    [0m common dendritic progenitor consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m common lymphoid progenitor consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m endothelial cell of lymphatic vessel consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m epithelial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m erythroblast consists of a single batch or is too small. Skip.         
[34mINFO    [0m erythrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m erythroid progenitor cell consists of a single batch or is too small.  
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m granulocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m hematopoietic multipotent progenitor cell consists of a single batch or
         is too small. Skip.                                                    
[34mINFO    [0m hepatic stellate cell consists of a single batch or is too small. Skip.
[34mINFO    [0m intrahepatic cholangiocyte consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m liver dendritic cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m lymphoid lineage restricted progenitor cell consists of a single batch 
         or is too small. Skip.                                                 
[34mINFO    [0m malignant cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m megakaryocyte-erythroid progenitor cell consists of a single batch or  
         is too small. Skip.                                                    
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid lineage restricted progenitor cell consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m neoplastic cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m non-classical monocyte consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m precursor B cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m pro-B cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m proerythroblast consists of a single batch or is too small. Skip.      
[34mINFO    [0m regulatory T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m type I pneumocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    20:00:39 k=90
[34mINFO    [0m CD1c-positive myeloid dendritic cell consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m CD4-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m Kupffer cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m capillary endothelial cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m cholangiocyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m classical monocyte consists of a single batch or is too small. Skip.   
[34mINFO    [0m common dendritic progenitor consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m common lymphoid progenitor consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m endothelial cell of lymphatic vessel consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m epithelial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m erythroblast consists of a single batch or is too small. Skip.         
[34mINFO    [0m erythrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m erythroid progenitor cell consists of a single batch or is too small.  
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m granulocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m hematopoietic multipotent progenitor cell consists of a single batch or
         is too small. Skip.                                                    
[34mINFO    [0m hepatic stellate cell consists of a single batch or is too small. Skip.
[34mINFO    [0m intrahepatic cholangiocyte consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m liver dendritic cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m lymphoid lineage restricted progenitor cell consists of a single batch 
         or is too small. Skip.                                                 
[34mINFO    [0m malignant cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m megakaryocyte-erythroid progenitor cell consists of a single batch or  
         is too small. Skip.                                                    
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid lineage restricted progenitor cell consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m neoplastic cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m non-classical monocyte consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m precursor B cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m pro-B cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m proerythroblast consists of a single batch or is too small. Skip.      
[34mINFO    [0m regulatory T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m type I pneumocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.

20:00:46 Leiden sweep: liver_bog_pca_512
    20:00:47 resolution=0.5
    20:00:47 resolution=1.0
    20:00:47 resolution=2.0
20:00:47 kNN sweep: liver_bog_pca_512
    20:00:47 k=15
[34mINFO    [0m CD1c-positive myeloid dendritic cell consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m CD4-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m Kupffer cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m capillary endothelial cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m cholangiocyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m classical monocyte consists of a single batch or is too small. Skip.   
[34mINFO    [0m common dendritic progenitor consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m common lymphoid progenitor consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m endothelial cell of lymphatic vessel consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m epithelial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m erythroblast consists of a single batch or is too small. Skip.         
[34mINFO    [0m erythrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m erythroid progenitor cell consists of a single batch or is too small.  
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m granulocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m hematopoietic multipotent progenitor cell consists of a single batch or
         is too small. Skip.                                                    
[34mINFO    [0m hepatic stellate cell consists of a single batch or is too small. Skip.
[34mINFO    [0m intrahepatic cholangiocyte consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m liver dendritic cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m lymphoid lineage restricted progenitor cell consists of a single batch 
         or is too small. Skip.                                                 
[34mINFO    [0m malignant cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m megakaryocyte-erythroid progenitor cell consists of a single batch or  
         is too small. Skip.                                                    
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid lineage restricted progenitor cell consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m neoplastic cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m non-classical monocyte consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m precursor B cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m pro-B cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m proerythroblast consists of a single batch or is too small. Skip.      
[34mINFO    [0m regulatory T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m type I pneumocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    20:00:51 k=30
[34mINFO    [0m CD1c-positive myeloid dendritic cell consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m CD4-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m Kupffer cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m capillary endothelial cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m cholangiocyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m classical monocyte consists of a single batch or is too small. Skip.   
[34mINFO    [0m common dendritic progenitor consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m common lymphoid progenitor consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m endothelial cell of lymphatic vessel consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m epithelial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m erythroblast consists of a single batch or is too small. Skip.         
[34mINFO    [0m erythrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m erythroid progenitor cell consists of a single batch or is too small.  
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m granulocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m hematopoietic multipotent progenitor cell consists of a single batch or
         is too small. Skip.                                                    
[34mINFO    [0m hepatic stellate cell consists of a single batch or is too small. Skip.
[34mINFO    [0m intrahepatic cholangiocyte consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m liver dendritic cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m lymphoid lineage restricted progenitor cell consists of a single batch 
         or is too small. Skip.                                                 
[34mINFO    [0m malignant cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m megakaryocyte-erythroid progenitor cell consists of a single batch or  
         is too small. Skip.                                                    
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid lineage restricted progenitor cell consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m neoplastic cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m non-classical monocyte consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m precursor B cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m pro-B cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m proerythroblast consists of a single batch or is too small. Skip.      
[34mINFO    [0m regulatory T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m type I pneumocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    20:00:54 k=90
[34mINFO    [0m CD1c-positive myeloid dendritic cell consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m CD4-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m Kupffer cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m basophil consists of a single batch or is too small. Skip.             
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m capillary endothelial cell consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m cholangiocyte consists of a single batch or is too small. Skip.        
[34mINFO    [0m classical monocyte consists of a single batch or is too small. Skip.   
[34mINFO    [0m common dendritic progenitor consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m common lymphoid progenitor consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m conventional dendritic cell consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m endothelial cell of lymphatic vessel consists of a single batch or is  
         too small. Skip.                                                       
[34mINFO    [0m epithelial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m erythroblast consists of a single batch or is too small. Skip.         
[34mINFO    [0m erythrocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m erythroid progenitor cell consists of a single batch or is too small.  
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m granulocyte consists of a single batch or is too small. Skip.          
[34mINFO    [0m hematopoietic multipotent progenitor cell consists of a single batch or
         is too small. Skip.                                                    
[34mINFO    [0m hepatic stellate cell consists of a single batch or is too small. Skip.
[34mINFO    [0m intrahepatic cholangiocyte consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m liver dendritic cell consists of a single batch or is too small. Skip. 
[34mINFO    [0m lymphocyte consists of a single batch or is too small. Skip.           
[34mINFO    [0m lymphoid lineage restricted progenitor cell consists of a single batch 
         or is too small. Skip.                                                 
[34mINFO    [0m malignant cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m megakaryocyte-erythroid progenitor cell consists of a single batch or  
         is too small. Skip.                                                    
[34mINFO    [0m myeloid cell consists of a single batch or is too small. Skip.         
[34mINFO    [0m myeloid lineage restricted progenitor cell consists of a single batch  
         or is too small. Skip.                                                 
[34mINFO    [0m neoplastic cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m non-classical monocyte consists of a single batch or is too small.     
         Skip.                                                                  
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m precursor B cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m pro-B cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m proerythroblast consists of a single batch or is too small. Skip.      
[34mINFO    [0m regulatory T cell consists of a single batch or is too small. Skip.    
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m type I pneumocyte consists of a single batch or is too small. Skip.    
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.

============================================================
20:01:01 Processing tissue: kidney
20:01:01 Pulling source cells...
  Source: 2000 cells
20:01:51 Pulling target cells...
  Target: 370 cells

20:03:48 Leiden sweep: kidney_geneformer
    20:03:48 resolution=0.5
    20:03:48 resolution=1.0
    20:03:48 resolution=2.0
20:03:48 kNN sweep: kidney_geneformer
    20:03:48 k=15
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of nephron consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m epithelial cell of proximal tubule consists of a single batch or is too
         small. Skip.                                                           
[34mINFO    [0m kidney collecting duct intercalated cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney collecting duct principal cell consists of a single batch or is 
         too small. Skip.                                                       
[34mINFO    [0m kidney connecting tubule epithelial cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney distal convoluted tubule epithelial cell consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m kidney interstitial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m kidney loop of Henle thick ascending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin ascending limb epithelial cell consists of a 
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin descending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m leukocyte consists of a single batch or is too small. Skip.            
[34mINFO    [0m mesenchymal stem cell consists of a single batch or is too small. Skip.
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m parietal epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m podocyte consists of a single batch or is too small. Skip.             
    20:03:54 k=30
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of nephron consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m epithelial cell of proximal tubule consists of a single batch or is too
         small. Skip.                                                           
[34mINFO    [0m kidney collecting duct intercalated cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney collecting duct principal cell consists of a single batch or is 
         too small. Skip.                                                       
[34mINFO    [0m kidney connecting tubule epithelial cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney distal convoluted tubule epithelial cell consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m kidney interstitial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m kidney loop of Henle thick ascending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin ascending limb epithelial cell consists of a 
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin descending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m leukocyte consists of a single batch or is too small. Skip.            
[34mINFO    [0m mesenchymal stem cell consists of a single batch or is too small. Skip.
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m parietal epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m podocyte consists of a single batch or is too small. Skip.             
    20:03:57 k=90
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of nephron consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m epithelial cell of proximal tubule consists of a single batch or is too
         small. Skip.                                                           
[34mINFO    [0m kidney collecting duct intercalated cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney collecting duct principal cell consists of a single batch or is 
         too small. Skip.                                                       
[34mINFO    [0m kidney connecting tubule epithelial cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney distal convoluted tubule epithelial cell consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m kidney interstitial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m kidney loop of Henle thick ascending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin ascending limb epithelial cell consists of a 
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin descending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m leukocyte consists of a single batch or is too small. Skip.            
[34mINFO    [0m mesenchymal stem cell consists of a single batch or is too small. Skip.
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m parietal epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m podocyte consists of a single batch or is too small. Skip.             

20:04:03 Leiden sweep: kidney_scvi
    20:04:03 resolution=0.5
    20:04:03 resolution=1.0
    20:04:03 resolution=2.0
20:04:03 kNN sweep: kidney_scvi
    20:04:03 k=15
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of nephron consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m epithelial cell of proximal tubule consists of a single batch or is too
         small. Skip.                                                           
[34mINFO    [0m kidney collecting duct intercalated cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney collecting duct principal cell consists of a single batch or is 
         too small. Skip.                                                       
[34mINFO    [0m kidney connecting tubule epithelial cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney distal convoluted tubule epithelial cell consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m kidney interstitial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m kidney loop of Henle thick ascending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin ascending limb epithelial cell consists of a 
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin descending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m leukocyte consists of a single batch or is too small. Skip.            
[34mINFO    [0m mesenchymal stem cell consists of a single batch or is too small. Skip.
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m parietal epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m podocyte consists of a single batch or is too small. Skip.             
    20:04:04 k=30
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of nephron consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m epithelial cell of proximal tubule consists of a single batch or is too
         small. Skip.                                                           
[34mINFO    [0m kidney collecting duct intercalated cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney collecting duct principal cell consists of a single batch or is 
         too small. Skip.                                                       
[34mINFO    [0m kidney connecting tubule epithelial cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney distal convoluted tubule epithelial cell consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m kidney interstitial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m kidney loop of Henle thick ascending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin ascending limb epithelial cell consists of a 
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin descending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m leukocyte consists of a single batch or is too small. Skip.            
[34mINFO    [0m mesenchymal stem cell consists of a single batch or is too small. Skip.
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m parietal epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m podocyte consists of a single batch or is too small. Skip.             
    20:04:06 k=90
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of nephron consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m epithelial cell of proximal tubule consists of a single batch or is too
         small. Skip.                                                           
[34mINFO    [0m kidney collecting duct intercalated cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney collecting duct principal cell consists of a single batch or is 
         too small. Skip.                                                       
[34mINFO    [0m kidney connecting tubule epithelial cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney distal convoluted tubule epithelial cell consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m kidney interstitial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m kidney loop of Henle thick ascending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin ascending limb epithelial cell consists of a 
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin descending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m leukocyte consists of a single batch or is too small. Skip.            
[34mINFO    [0m mesenchymal stem cell consists of a single batch or is too small. Skip.
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m parietal epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m podocyte consists of a single batch or is too small. Skip.             

20:04:08 Leiden sweep: kidney_scgpt
    20:04:09 resolution=0.5
    20:04:09 resolution=1.0
    20:04:09 resolution=2.0
20:04:09 kNN sweep: kidney_scgpt
    20:04:09 k=15
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of nephron consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m epithelial cell of proximal tubule consists of a single batch or is too
         small. Skip.                                                           
[34mINFO    [0m kidney collecting duct intercalated cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney collecting duct principal cell consists of a single batch or is 
         too small. Skip.                                                       
[34mINFO    [0m kidney connecting tubule epithelial cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney distal convoluted tubule epithelial cell consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m kidney interstitial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m kidney loop of Henle thick ascending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin ascending limb epithelial cell consists of a 
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin descending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m leukocyte consists of a single batch or is too small. Skip.            
[34mINFO    [0m mesenchymal stem cell consists of a single batch or is too small. Skip.
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m parietal epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m podocyte consists of a single batch or is too small. Skip.             
    20:04:10 k=30
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of nephron consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m epithelial cell of proximal tubule consists of a single batch or is too
         small. Skip.                                                           
[34mINFO    [0m kidney collecting duct intercalated cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney collecting duct principal cell consists of a single batch or is 
         too small. Skip.                                                       
[34mINFO    [0m kidney connecting tubule epithelial cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney distal convoluted tubule epithelial cell consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m kidney interstitial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m kidney loop of Henle thick ascending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin ascending limb epithelial cell consists of a 
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin descending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m leukocyte consists of a single batch or is too small. Skip.            
[34mINFO    [0m mesenchymal stem cell consists of a single batch or is too small. Skip.
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m parietal epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m podocyte consists of a single batch or is too small. Skip.             
    20:04:11 k=90
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of nephron consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m epithelial cell of proximal tubule consists of a single batch or is too
         small. Skip.                                                           
[34mINFO    [0m kidney collecting duct intercalated cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney collecting duct principal cell consists of a single batch or is 
         too small. Skip.                                                       
[34mINFO    [0m kidney connecting tubule epithelial cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney distal convoluted tubule epithelial cell consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m kidney interstitial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m kidney loop of Henle thick ascending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin ascending limb epithelial cell consists of a 
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin descending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m leukocyte consists of a single batch or is too small. Skip.            
[34mINFO    [0m mesenchymal stem cell consists of a single batch or is too small. Skip.
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m parietal epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m podocyte consists of a single batch or is too small. Skip.             

20:04:14 Leiden sweep: kidney_random_projection
    20:04:14 resolution=0.5
    20:04:14 resolution=1.0
    20:04:15 resolution=2.0
20:04:15 kNN sweep: kidney_random_projection
    20:04:15 k=15
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of nephron consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m epithelial cell of proximal tubule consists of a single batch or is too
         small. Skip.                                                           
[34mINFO    [0m kidney collecting duct intercalated cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney collecting duct principal cell consists of a single batch or is 
         too small. Skip.                                                       
[34mINFO    [0m kidney connecting tubule epithelial cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney distal convoluted tubule epithelial cell consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m kidney interstitial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m kidney loop of Henle thick ascending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin ascending limb epithelial cell consists of a 
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin descending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m leukocyte consists of a single batch or is too small. Skip.            
[34mINFO    [0m mesenchymal stem cell consists of a single batch or is too small. Skip.
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m parietal epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m podocyte consists of a single batch or is too small. Skip.             
    20:04:16 k=30
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of nephron consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m epithelial cell of proximal tubule consists of a single batch or is too
         small. Skip.                                                           
[34mINFO    [0m kidney collecting duct intercalated cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney collecting duct principal cell consists of a single batch or is 
         too small. Skip.                                                       
[34mINFO    [0m kidney connecting tubule epithelial cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney distal convoluted tubule epithelial cell consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m kidney interstitial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m kidney loop of Henle thick ascending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin ascending limb epithelial cell consists of a 
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin descending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m leukocyte consists of a single batch or is too small. Skip.            
[34mINFO    [0m mesenchymal stem cell consists of a single batch or is too small. Skip.
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m parietal epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m podocyte consists of a single batch or is too small. Skip.             
    20:04:17 k=90
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of nephron consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m epithelial cell of proximal tubule consists of a single batch or is too
         small. Skip.                                                           
[34mINFO    [0m kidney collecting duct intercalated cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney collecting duct principal cell consists of a single batch or is 
         too small. Skip.                                                       
[34mINFO    [0m kidney connecting tubule epithelial cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney distal convoluted tubule epithelial cell consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m kidney interstitial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m kidney loop of Henle thick ascending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin ascending limb epithelial cell consists of a 
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin descending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m leukocyte consists of a single batch or is too small. Skip.            
[34mINFO    [0m mesenchymal stem cell consists of a single batch or is too small. Skip.
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m parietal epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m podocyte consists of a single batch or is too small. Skip.             

20:04:21 Leiden sweep: kidney_untrained_encoder
    20:04:21 resolution=0.5
    20:04:22 resolution=1.0
    20:04:22 resolution=2.0
20:04:22 kNN sweep: kidney_untrained_encoder
    20:04:22 k=15
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of nephron consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m epithelial cell of proximal tubule consists of a single batch or is too
         small. Skip.                                                           
[34mINFO    [0m kidney collecting duct intercalated cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney collecting duct principal cell consists of a single batch or is 
         too small. Skip.                                                       
[34mINFO    [0m kidney connecting tubule epithelial cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney distal convoluted tubule epithelial cell consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m kidney interstitial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m kidney loop of Henle thick ascending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin ascending limb epithelial cell consists of a 
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin descending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m leukocyte consists of a single batch or is too small. Skip.            
[34mINFO    [0m mesenchymal stem cell consists of a single batch or is too small. Skip.
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m parietal epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m podocyte consists of a single batch or is too small. Skip.             
    20:04:24 k=30
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of nephron consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m epithelial cell of proximal tubule consists of a single batch or is too
         small. Skip.                                                           
[34mINFO    [0m kidney collecting duct intercalated cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney collecting duct principal cell consists of a single batch or is 
         too small. Skip.                                                       
[34mINFO    [0m kidney connecting tubule epithelial cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney distal convoluted tubule epithelial cell consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m kidney interstitial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m kidney loop of Henle thick ascending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin ascending limb epithelial cell consists of a 
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin descending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m leukocyte consists of a single batch or is too small. Skip.            
[34mINFO    [0m mesenchymal stem cell consists of a single batch or is too small. Skip.
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m parietal epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m podocyte consists of a single batch or is too small. Skip.             
    20:04:25 k=90
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of nephron consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m epithelial cell of proximal tubule consists of a single batch or is too
         small. Skip.                                                           
[34mINFO    [0m kidney collecting duct intercalated cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney collecting duct principal cell consists of a single batch or is 
         too small. Skip.                                                       
[34mINFO    [0m kidney connecting tubule epithelial cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney distal convoluted tubule epithelial cell consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m kidney interstitial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m kidney loop of Henle thick ascending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin ascending limb epithelial cell consists of a 
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin descending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m leukocyte consists of a single batch or is too small. Skip.            
[34mINFO    [0m mesenchymal stem cell consists of a single batch or is too small. Skip.
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m parietal epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m podocyte consists of a single batch or is too small. Skip.             

20:04:30 Leiden sweep: kidney_bog_pca_512
    20:04:30 resolution=0.5
    20:04:30 resolution=1.0
    20:04:30 resolution=2.0
20:04:30 kNN sweep: kidney_bog_pca_512
    20:04:30 k=15
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of nephron consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m epithelial cell of proximal tubule consists of a single batch or is too
         small. Skip.                                                           
[34mINFO    [0m kidney collecting duct intercalated cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney collecting duct principal cell consists of a single batch or is 
         too small. Skip.                                                       
[34mINFO    [0m kidney connecting tubule epithelial cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney distal convoluted tubule epithelial cell consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m kidney interstitial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m kidney loop of Henle thick ascending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin ascending limb epithelial cell consists of a 
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin descending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m leukocyte consists of a single batch or is too small. Skip.            
[34mINFO    [0m mesenchymal stem cell consists of a single batch or is too small. Skip.
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m parietal epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m podocyte consists of a single batch or is too small. Skip.             
    20:04:31 k=30
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of nephron consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m epithelial cell of proximal tubule consists of a single batch or is too
         small. Skip.                                                           
[34mINFO    [0m kidney collecting duct intercalated cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney collecting duct principal cell consists of a single batch or is 
         too small. Skip.                                                       
[34mINFO    [0m kidney connecting tubule epithelial cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney distal convoluted tubule epithelial cell consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m kidney interstitial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m kidney loop of Henle thick ascending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin ascending limb epithelial cell consists of a 
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin descending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m leukocyte consists of a single batch or is too small. Skip.            
[34mINFO    [0m mesenchymal stem cell consists of a single batch or is too small. Skip.
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m parietal epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m podocyte consists of a single batch or is too small. Skip.             
    20:04:33 k=90
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of nephron consists of a single batch or is too small. 
         Skip.                                                                  
[34mINFO    [0m epithelial cell of proximal tubule consists of a single batch or is too
         small. Skip.                                                           
[34mINFO    [0m kidney collecting duct intercalated cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney collecting duct principal cell consists of a single batch or is 
         too small. Skip.                                                       
[34mINFO    [0m kidney connecting tubule epithelial cell consists of a single batch or 
         is too small. Skip.                                                    
[34mINFO    [0m kidney distal convoluted tubule epithelial cell consists of a single   
         batch or is too small. Skip.                                           
[34mINFO    [0m kidney interstitial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m kidney loop of Henle thick ascending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin ascending limb epithelial cell consists of a 
         single batch or is too small. Skip.                                    
[34mINFO    [0m kidney loop of Henle thin descending limb epithelial cell consists of a
         single batch or is too small. Skip.                                    
[34mINFO    [0m leukocyte consists of a single batch or is too small. Skip.            
[34mINFO    [0m mesenchymal stem cell consists of a single batch or is too small. Skip.
[34mINFO    [0m native cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m parietal epithelial cell consists of a single batch or is too small.   
         Skip.                                                                  
[34mINFO    [0m podocyte consists of a single batch or is too small. Skip.             

============================================================
20:04:37 Processing tissue: brain
20:04:37 Pulling source cells...
  Source: 2000 cells
20:05:33 Pulling target cells...
  Target: 59 cells

20:07:30 Leiden sweep: brain_geneformer
    20:07:30 resolution=0.5
    20:07:30 resolution=1.0
    20:07:30 resolution=2.0
20:07:30 kNN sweep: brain_geneformer
    20:07:30 k=15
[34mINFO    [0m B cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m mature T cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m microglial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mural cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m natural killer cell consists of a single batch or is too small. Skip.  
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m neutrophil consists of a single batch or is too small. Skip.           
[34mINFO    [0m oligodendrocyte consists of a single batch or is too small. Skip.      
[34mINFO    [0m oligodendrocyte precursor cell consists of a single batch or is too    
         small. Skip.                                                           
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m plasma cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    20:07:36 k=30
[34mINFO    [0m B cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m mature T cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m microglial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mural cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m natural killer cell consists of a single batch or is too small. Skip.  
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m neutrophil consists of a single batch or is too small. Skip.           
[34mINFO    [0m oligodendrocyte consists of a single batch or is too small. Skip.      
[34mINFO    [0m oligodendrocyte precursor cell consists of a single batch or is too    
         small. Skip.                                                           
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m plasma cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    20:07:42 k=90
[34mINFO    [0m B cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m mature T cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m microglial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mural cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m natural killer cell consists of a single batch or is too small. Skip.  
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m neutrophil consists of a single batch or is too small. Skip.           
[34mINFO    [0m oligodendrocyte consists of a single batch or is too small. Skip.      
[34mINFO    [0m oligodendrocyte precursor cell consists of a single batch or is too    
         small. Skip.                                                           
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m plasma cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.

20:07:48 Leiden sweep: brain_scvi
    20:07:48 resolution=0.5
    20:07:49 resolution=1.0
    20:07:49 resolution=2.0
20:07:49 kNN sweep: brain_scvi
    20:07:49 k=15
[34mINFO    [0m B cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m mature T cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m microglial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mural cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m natural killer cell consists of a single batch or is too small. Skip.  
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m neutrophil consists of a single batch or is too small. Skip.           
[34mINFO    [0m oligodendrocyte consists of a single batch or is too small. Skip.      
[34mINFO    [0m oligodendrocyte precursor cell consists of a single batch or is too    
         small. Skip.                                                           
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m plasma cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    20:07:50 k=30
[34mINFO    [0m B cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m mature T cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m microglial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mural cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m natural killer cell consists of a single batch or is too small. Skip.  
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m neutrophil consists of a single batch or is too small. Skip.           
[34mINFO    [0m oligodendrocyte consists of a single batch or is too small. Skip.      
[34mINFO    [0m oligodendrocyte precursor cell consists of a single batch or is too    
         small. Skip.                                                           
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m plasma cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    20:07:51 k=90
[34mINFO    [0m B cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m mature T cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m microglial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mural cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m natural killer cell consists of a single batch or is too small. Skip.  
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m neutrophil consists of a single batch or is too small. Skip.           
[34mINFO    [0m oligodendrocyte consists of a single batch or is too small. Skip.      
[34mINFO    [0m oligodendrocyte precursor cell consists of a single batch or is too    
         small. Skip.                                                           
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m plasma cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.

20:07:54 Leiden sweep: brain_scgpt
    20:07:54 resolution=0.5
    20:07:54 resolution=1.0
    20:07:54 resolution=2.0
20:07:54 kNN sweep: brain_scgpt
    20:07:54 k=15
[34mINFO    [0m B cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m mature T cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m microglial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mural cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m natural killer cell consists of a single batch or is too small. Skip.  
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m neutrophil consists of a single batch or is too small. Skip.           
[34mINFO    [0m oligodendrocyte consists of a single batch or is too small. Skip.      
[34mINFO    [0m oligodendrocyte precursor cell consists of a single batch or is too    
         small. Skip.                                                           
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m plasma cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    20:07:55 k=30
[34mINFO    [0m B cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m mature T cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m microglial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mural cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m natural killer cell consists of a single batch or is too small. Skip.  
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m neutrophil consists of a single batch or is too small. Skip.           
[34mINFO    [0m oligodendrocyte consists of a single batch or is too small. Skip.      
[34mINFO    [0m oligodendrocyte precursor cell consists of a single batch or is too    
         small. Skip.                                                           
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m plasma cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    20:07:56 k=90
[34mINFO    [0m B cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m mature T cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m microglial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mural cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m natural killer cell consists of a single batch or is too small. Skip.  
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m neutrophil consists of a single batch or is too small. Skip.           
[34mINFO    [0m oligodendrocyte consists of a single batch or is too small. Skip.      
[34mINFO    [0m oligodendrocyte precursor cell consists of a single batch or is too    
         small. Skip.                                                           
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m plasma cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.

20:07:59 Leiden sweep: brain_random_projection
    20:07:59 resolution=0.5
    20:07:59 resolution=1.0
    20:07:59 resolution=2.0
20:07:59 kNN sweep: brain_random_projection
    20:07:59 k=15
[34mINFO    [0m B cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m mature T cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m microglial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mural cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m natural killer cell consists of a single batch or is too small. Skip.  
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m neutrophil consists of a single batch or is too small. Skip.           
[34mINFO    [0m oligodendrocyte consists of a single batch or is too small. Skip.      
[34mINFO    [0m oligodendrocyte precursor cell consists of a single batch or is too    
         small. Skip.                                                           
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m plasma cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    20:08:02 k=30
[34mINFO    [0m B cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m mature T cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m microglial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mural cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m natural killer cell consists of a single batch or is too small. Skip.  
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m neutrophil consists of a single batch or is too small. Skip.           
[34mINFO    [0m oligodendrocyte consists of a single batch or is too small. Skip.      
[34mINFO    [0m oligodendrocyte precursor cell consists of a single batch or is too    
         small. Skip.                                                           
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m plasma cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    20:08:03 k=90
[34mINFO    [0m B cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m mature T cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m microglial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mural cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m natural killer cell consists of a single batch or is too small. Skip.  
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m neutrophil consists of a single batch or is too small. Skip.           
[34mINFO    [0m oligodendrocyte consists of a single batch or is too small. Skip.      
[34mINFO    [0m oligodendrocyte precursor cell consists of a single batch or is too    
         small. Skip.                                                           
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m plasma cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.

20:08:07 Leiden sweep: brain_untrained_encoder
    20:08:07 resolution=0.5
    20:08:08 resolution=1.0
    20:08:08 resolution=2.0
20:08:08 kNN sweep: brain_untrained_encoder
    20:08:08 k=15
[34mINFO    [0m B cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m mature T cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m microglial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mural cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m natural killer cell consists of a single batch or is too small. Skip.  
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m neutrophil consists of a single batch or is too small. Skip.           
[34mINFO    [0m oligodendrocyte consists of a single batch or is too small. Skip.      
[34mINFO    [0m oligodendrocyte precursor cell consists of a single batch or is too    
         small. Skip.                                                           
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m plasma cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    20:08:10 k=30
[34mINFO    [0m B cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m mature T cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m microglial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mural cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m natural killer cell consists of a single batch or is too small. Skip.  
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m neutrophil consists of a single batch or is too small. Skip.           
[34mINFO    [0m oligodendrocyte consists of a single batch or is too small. Skip.      
[34mINFO    [0m oligodendrocyte precursor cell consists of a single batch or is too    
         small. Skip.                                                           
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m plasma cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    20:08:12 k=90
[34mINFO    [0m B cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m mature T cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m microglial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mural cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m natural killer cell consists of a single batch or is too small. Skip.  
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m neutrophil consists of a single batch or is too small. Skip.           
[34mINFO    [0m oligodendrocyte consists of a single batch or is too small. Skip.      
[34mINFO    [0m oligodendrocyte precursor cell consists of a single batch or is too    
         small. Skip.                                                           
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m plasma cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.

20:08:16 Leiden sweep: brain_bog_pca_512
    20:08:16 resolution=0.5
    20:08:16 resolution=1.0
    20:08:17 resolution=2.0
20:08:17 kNN sweep: brain_bog_pca_512
    20:08:17 k=15
[34mINFO    [0m B cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m mature T cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m microglial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mural cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m natural killer cell consists of a single batch or is too small. Skip.  
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m neutrophil consists of a single batch or is too small. Skip.           
[34mINFO    [0m oligodendrocyte consists of a single batch or is too small. Skip.      
[34mINFO    [0m oligodendrocyte precursor cell consists of a single batch or is too    
         small. Skip.                                                           
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m plasma cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    20:08:19 k=30
[34mINFO    [0m B cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m mature T cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m microglial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mural cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m natural killer cell consists of a single batch or is too small. Skip.  
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m neutrophil consists of a single batch or is too small. Skip.           
[34mINFO    [0m oligodendrocyte consists of a single batch or is too small. Skip.      
[34mINFO    [0m oligodendrocyte precursor cell consists of a single batch or is too    
         small. Skip.                                                           
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m plasma cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.
    20:08:21 k=90
[34mINFO    [0m B cell consists of a single batch or is too small. Skip.               
[34mINFO    [0m CD8-positive, alpha-beta T cell consists of a single batch or is too   
         small. Skip.                                                           
[34mINFO    [0m bronchus fibroblast of lung consists of a single batch or is too small.
         Skip.                                                                  
[34mINFO    [0m dendritic cell consists of a single batch or is too small. Skip.       
[34mINFO    [0m endothelial cell consists of a single batch or is too small. Skip.     
[34mINFO    [0m epithelial cell of lung consists of a single batch or is too small.    
         Skip.                                                                  
[34mINFO    [0m fibroblast of lung consists of a single batch or is too small. Skip.   
[34mINFO    [0m mast cell consists of a single batch or is too small. Skip.            
[34mINFO    [0m mature T cell consists of a single batch or is too small. Skip.        
[34mINFO    [0m microglial cell consists of a single batch or is too small. Skip.      
[34mINFO    [0m monocyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m mural cell consists of a single batch or is too small. Skip.           
[34mINFO    [0m natural killer cell consists of a single batch or is too small. Skip.  
[34mINFO    [0m neuron consists of a single batch or is too small. Skip.               
[34mINFO    [0m neutrophil consists of a single batch or is too small. Skip.           
[34mINFO    [0m oligodendrocyte consists of a single batch or is too small. Skip.      
[34mINFO    [0m oligodendrocyte precursor cell consists of a single batch or is too    
         small. Skip.                                                           
[34mINFO    [0m pericyte consists of a single batch or is too small. Skip.             
[34mINFO    [0m plasma cell consists of a single batch or is too small. Skip.          
[34mINFO    [0m smooth muscle cell consists of a single batch or is too small. Skip.   
[34mINFO    [0m vein endothelial cell consists of a single batch or is too small. Skip.

============================================================
20:08:24 Computing ranking stability (Kendall's tau)...

============================================================
20:08:24 SCORECARD: Ranking Stability (extreme hyperparameter tau)
Metric                    Mean tau     Winner changes     Predicted tau range
--------------------------------------------------------------------------------
nmi_leiden                0.933        0/4 tissues        [0.5, 0.7] [OUT OF RANGE]
ari_leiden                0.8          1/4 tissues        [0.4, 0.6] [OUT OF RANGE]
clisi                     0.958        0/4 tissues        [0.3, 0.6] [OUT OF RANGE]
ilisi                     nan          1/4 tissues        [0.2, 0.5] [OUT OF RANGE]
kbet                      N/A          0/4 tissues        [0.1, 0.4] [N/A]
graph_connectivity        0.933        0/4 tissues        [0.3, 0.6] [OUT OF RANGE]

20:08:24 Results saved to results/exp10_scib_audit/hyperparameter_sensitivity.json


=== STDERR ===

Tissues:   0%|          | 0/4 [00:00<?, ?it/s]/usr/local/lib/python3.11/functools.py:909: ImplicitModificationWarning: Transforming to str index.
  return dispatch(args[0].__class__)(*args, **kw)
/usr/local/lib/python3.11/functools.py:909: ImplicitModificationWarning: Transforming to str index.
  return dispatch(args[0].__class__)(*args, **kw)
/usr/local/lib/python3.11/functools.py:909: ImplicitModificationWarning: Transforming to str index.
  return dispatch(args[0].__class__)(*args, **kw)
/usr/local/lib/python3.11/functools.py:909: ImplicitModificationWarning: Transforming to str index.
  return dispatch(args[0].__class__)(*args, **kw)
/usr/local/lib/python3.11/site-packages/pynndescent/pynndescent_.py:1241: UserWarning: Failed to correctly find n_neighbors for some samples. Results may be less than ideal. Try re-running with different parameters.
  warn(
/usr/local/lib/python3.11/site-packages/pynndescent/pynndescent_.py:1241: UserWarning: Failed to correctly find n_neighbors for some samples. Results may be less than ideal. Try re-running with different parameters.
  warn(
/usr/local/lib/python3.11/site-packages/pynndescent/pynndescent_.py:1241: UserWarning: Failed to correctly find n_neighbors for some samples. Results may be less than ideal. Try re-running with different parameters.
  warn(
/usr/local/lib/python3.11/site-packages/pynndescent/pynndescent_.py:1241: UserWarning: Failed to correctly find n_neighbors for some samples. Results may be less than ideal. Try re-running with different parameters.
  warn(
/usr/local/lib/python3.11/site-packages/pynndescent/pynndescent_.py:1241: UserWarning: Failed to correctly find n_neighbors for some samples. Results may be less than ideal. Try re-running with different parameters.
  warn(
/usr/local/lib/python3.11/site-packages/pynndescent/pynndescent_.py:1241: UserWarning: Failed to correctly find n_neighbors for some samples. Results may be less than ideal. Try re-running with different parameters.
  warn(
/usr/local/lib/python3.11/site-packages/pynndescent/pynndescent_.py:1241: UserWarning: Failed to correctly find n_neighbors for some samples. Results may be less than ideal. Try re-running with different parameters.
  warn(

Tissues:  25%|██▌       | 1/4 [13:07<39:22, 787.38s/it]/usr/local/lib/python3.11/functools.py:909: ImplicitModificationWarning: Transforming to str index.
  return dispatch(args[0].__class__)(*args, **kw)
/usr/local/lib/python3.11/functools.py:909: ImplicitModificationWarning: Transforming to str index.
  return dispatch(args[0].__class__)(*args, **kw)
/usr/local/lib/python3.11/functools.py:909: ImplicitModificationWarning: Transforming to str index.
  return dispatch(args[0].__class__)(*args, **kw)
/usr/local/lib/python3.11/functools.py:909: ImplicitModificationWarning: Transforming to str index.
  return dispatch(args[0].__class__)(*args, **kw)

Tissues:  50%|█████     | 2/4 [18:46<17:27, 523.80s/it]/usr/local/lib/python3.11/functools.py:909: ImplicitModificationWarning: Transforming to str index.
  return dispatch(args[0].__class__)(*args, **kw)
/usr/local/lib/python3.11/functools.py:909: ImplicitModificationWarning: Transforming to str index.
  return dispatch(args[0].__class__)(*args, **kw)
/usr/local/lib/python3.11/functools.py:909: ImplicitModificationWarning: Transforming to str index.
  return dispatch(args[0].__class__)(*args, **kw)
/usr/local/lib/python3.11/functools.py:909: ImplicitModificationWarning: Transforming to str index.
  return dispatch(args[0].__class__)(*args, **kw)

Tissues:  75%|███████▌  | 3/4 [22:22<06:23, 383.36s/it]/usr/local/lib/python3.11/functools.py:909: ImplicitModificationWarning: Transforming to str index.
  return dispatch(args[0].__class__)(*args, **kw)
/usr/local/lib/python3.11/functools.py:909: ImplicitModificationWarning: Transforming to str index.
  return dispatch(args[0].__class__)(*args, **kw)
/usr/local/lib/python3.11/functools.py:909: ImplicitModificationWarning: Transforming to str index.
  return dispatch(args[0].__class__)(*args, **kw)
/usr/local/lib/python3.11/functools.py:909: ImplicitModificationWarning: Transforming to str index.
  return dispatch(args[0].__class__)(*args, **kw)

Tissues: 100%|██████████| 4/4 [26:10<00:00, 321.76s/it]
Tissues: 100%|██████████| 4/4 [26:10<00:00, 392.56s/it]


=== RETURN CODE: 0 ===
