.gitignore
.pre-commit-config.yaml
AUTHORS
CHANGELOG.md
LICENSE
MANIFEST.in
README.md
pyproject.toml
setup.py
.github/workflows/release.yml
.github/workflows/test.yml
docs/format.md
rust/.gitignore
rust/Cargo.toml
rust/build.rs
rust/asan/gate.cpp
rust/asan/run.sh
rust/csrc/pfor_shim.cpp
rust/src/cell.rs
rust/src/cell_zstd.rs
rust/src/decode.rs
rust/src/encode.rs
rust/src/lib.rs
rust/src/narrow.rs
rust/src/pfor.rs
rust/src/profile.rs
rust/src/shx.rs
rust/src/shx_read.rs
rust/vendor/PATCHES.md
rust/vendor/FastPFor/LICENSE
rust/vendor/FastPFor/PROVENANCE.md
rust/vendor/FastPFor/headers/VarIntG8IU.h
rust/vendor/FastPFor/headers/bitpacking.h
rust/vendor/FastPFor/headers/bitpackingaligned.h
rust/vendor/FastPFor/headers/bitpackinghelpers.h
rust/vendor/FastPFor/headers/bitpackingunaligned.h
rust/vendor/FastPFor/headers/blockpacking.h
rust/vendor/FastPFor/headers/codecfactory.h
rust/vendor/FastPFor/headers/codecs.h
rust/vendor/FastPFor/headers/common.h
rust/vendor/FastPFor/headers/compositecodec.h
rust/vendor/FastPFor/headers/cpubenchmark.h
rust/vendor/FastPFor/headers/csv.h
rust/vendor/FastPFor/headers/deltautil.h
rust/vendor/FastPFor/headers/entropy.h
rust/vendor/FastPFor/headers/externalvector.h
rust/vendor/FastPFor/headers/fastpfor.h
rust/vendor/FastPFor/headers/horizontalbitpacking.h
rust/vendor/FastPFor/headers/maropuparser.h
rust/vendor/FastPFor/headers/memutil.h
rust/vendor/FastPFor/headers/mersenne.h
rust/vendor/FastPFor/headers/newpfor.h
rust/vendor/FastPFor/headers/optpfor.h
rust/vendor/FastPFor/headers/packingvectors.h
rust/vendor/FastPFor/headers/pfor.h
rust/vendor/FastPFor/headers/pfor2008.h
rust/vendor/FastPFor/headers/rolledbitpacking.h
rust/vendor/FastPFor/headers/simdbinarypacking.h
rust/vendor/FastPFor/headers/simdbitpacking.h
rust/vendor/FastPFor/headers/simdfastpfor.h
rust/vendor/FastPFor/headers/simdgroupsimple.h
rust/vendor/FastPFor/headers/simdnewpfor.h
rust/vendor/FastPFor/headers/simdoptpfor.h
rust/vendor/FastPFor/headers/simdpfor.h
rust/vendor/FastPFor/headers/simdvariablebyte.h
rust/vendor/FastPFor/headers/simple16.h
rust/vendor/FastPFor/headers/simple8b.h
rust/vendor/FastPFor/headers/simple8b_rle.h
rust/vendor/FastPFor/headers/simple9.h
rust/vendor/FastPFor/headers/simple9_rle.h
rust/vendor/FastPFor/headers/snappydelta.h
rust/vendor/FastPFor/headers/streamvariablebyte.h
rust/vendor/FastPFor/headers/stringutil.h
rust/vendor/FastPFor/headers/synthetic.h
rust/vendor/FastPFor/headers/usimdbitpacking.h
rust/vendor/FastPFor/headers/util.h
rust/vendor/FastPFor/headers/variablebyte.h
rust/vendor/FastPFor/headers/varintgb.h
rust/vendor/FastPFor/headers/vsencoding.h
rust/vendor/FastPFor/headers/ztimer.h
rust/vendor/FastPFor/src/bitpacking.cpp
rust/vendor/FastPFor/src/bitpackingaligned.cpp
rust/vendor/FastPFor/src/bitpackingunaligned.cpp
rust/vendor/FastPFor/src/codecfactory.cpp
rust/vendor/FastPFor/src/horizontalbitpacking.cpp
rust/vendor/FastPFor/src/simdbitpacking.cpp
rust/vendor/FastPFor/src/simdunalignedbitpacking.cpp
rust/vendor/FastPFor/src/streamvbyte.c
rust/vendor/FastPFor/src/varintdecode.c
src/cellstream/__init__.py
src/cellstream/_dataclass_eq.py
src/cellstream/_version.py
src/cellstream/anndata_backend.py
src/cellstream/cli.py
src/cellstream/codecs.py
src/cellstream/errors.py
src/cellstream/grouping.py
src/cellstream/h5ad_io.py
src/cellstream/header.py
src/cellstream/lock.py
src/cellstream/manifest.py
src/cellstream/matrices.py
src/cellstream/mudata_adapter.py
src/cellstream/narrow.py
src/cellstream/pin.py
src/cellstream/prefetch.py
src/cellstream/read.py
src/cellstream/runtime.py
src/cellstream/shard_io.py
src/cellstream/shm.py
src/cellstream/workers.py
src/cellstream/write.py
src/cellstream.egg-info/PKG-INFO
src/cellstream.egg-info/SOURCES.txt
src/cellstream.egg-info/dependency_links.txt
src/cellstream.egg-info/entry_points.txt
src/cellstream.egg-info/requires.txt
src/cellstream.egg-info/scm_file_list.json
src/cellstream.egg-info/scm_version.json
src/cellstream.egg-info/top_level.txt
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src/cellstream/cell/_rust_dispatch.py
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src/cellstream/cell/reader.py
src/cellstream/cell/source.py
src/cellstream/cell/view.py
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src/cellstream/v2/dtypes.py
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src/cellstream/v2/materialize.py
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src/cellstream/v2/writer.py
src/cellstream/v2/kernels/__init__.py
src/cellstream/v2/kernels/loader.py
src/cellstream/v2/kernels/row_gather.cu
tests/_archive_helpers.py
tests/_stale_stat.py
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tests/test_anndata_backend.py
tests/test_archive_helpers.py
tests/test_bucket3_decompose_obs.py
tests/test_bucket3_grouped_graphs.py
tests/test_bucket3_header_graphs.py
tests/test_bucket3_integration.py
tests/test_bucket3_modality_meta.py
tests/test_bucket3_mudata_adapter.py
tests/test_bucket3_read_anndata.py
tests/test_bucket3_reassemble.py
tests/test_bucket3_to_mudata.py
tests/test_cast_data_into.py
tests/test_codecs.py
tests/test_dataclass_eq_313.py
tests/test_errors.py
tests/test_grouping.py
tests/test_grouping_missing_labels.py
tests/test_h5ad_io.py
tests/test_hardening.py
tests/test_header.py
tests/test_header_modality_meta.py
tests/test_header_multimatrix.py
tests/test_lock.py
tests/test_manifest.py
tests/test_manifest_v4.py
tests/test_manifest_v4_modality.py
tests/test_matrices.py
tests/test_matrices_modality.py
tests/test_metadata_validation.py
tests/test_mudata_adapter.py
tests/test_mudata_missing.py
tests/test_multimatrix_integration.py
tests/test_multimatrix_streaming.py
tests/test_multimodal_roundtrip.py
tests/test_narrow.py
tests/test_narrow_h5ad.py
tests/test_option_parity.py
tests/test_out_of_shm.py
tests/test_packed_only.py
tests/test_read_modality.py
tests/test_read_multimatrix.py
tests/test_shard_io.py
tests/test_shm.py
tests/test_shm_alloc_exception_safety.py
tests/test_smoke.py
tests/test_stale_stat_harness.py
tests/test_workers_omp_env.py
tests/test_write_modality_routing.py
tests/test_write_multimatrix_routing.py
tests/test_write_sharded.py
tests/cell/__init__.py
tests/cell/conftest.py
tests/cell/test_annotation_matrices.py
tests/cell/test_archive_writer.py
tests/cell/test_archive_writer_coalesce.py
tests/cell/test_bulk.py
tests/cell/test_cell_flush_rollback.py
tests/cell/test_cell_rust_gate.py
tests/cell/test_cell_write_lock.py
tests/cell/test_cell_zstd_frame_cap.py
tests/cell/test_codec.py
tests/cell/test_column_bounds.py
tests/cell/test_concat.py
tests/cell/test_concat_annotations.py
tests/cell/test_decode_bounds_subprocess.py
tests/cell/test_decode_cells_exception_safety.py
tests/cell/test_encode_capacity_subprocess.py
tests/cell/test_errors.py
tests/cell/test_fallback_equivalence.py
tests/cell/test_format.py
tests/cell/test_format_spec_conformance.py
tests/cell/test_gather_n_threads.py
tests/cell/test_gather_row_ids.py
tests/cell/test_group_missing_labels.py
tests/cell/test_group_spans.py
tests/cell/test_groups.py
tests/cell/test_manifest_cell.py
tests/cell/test_output_backing.py
tests/cell/test_packed_cell.py
tests/cell/test_pfor_encode_capacity.py
tests/cell/test_pfor_rust_decode.py
tests/cell/test_pfor_rust_encode.py
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tests/cell/test_reencode_dtype.py
tests/cell/test_reorder_frames.py
tests/cell/test_rust_visibility.py
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tests/packed/golden/expected.json
tests/packed/golden/generate_packed_golden.py
tests/packed/golden/grouped.shardpack
tests/packed/golden/plain.shardpack
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tests/v2/conftest.py
tests/v2/test_always_uint32.py
tests/v2/test_byte_filter_api.py
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tests/v2/test_reader_cpu_integrity.py
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tests/v2/test_write_default_n_workers.py
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tests/v2/gpu/test_to_cupy.py
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