add_feature()
func_annot()
find_attc_max()
search_attc()
Config
read_hmm()
scan_hmm_bank()
expand()
find_attc()
local_max()
read_infernal()
find_integrase()
Integron
find_integron()
GembaseDB
ProdigalDB
ProteinDB
SeqDesc
_log
filter_calin()
integrons_report()
merge_results()
summary()
Topology
FastaIterator
get_name_from_path()
log_level()
make_multi_fasta_reader()
model_len()
read_multi_fasta()
integron_finder
integron_finder.annotation
integron_finder.attc
integron_finder.config
integron_finder.hmm
integron_finder.infernal
integron_finder.integrase
integron_finder.integron
integron_finder.prot_db
integron_finder.results
integron_finder.topology
integron_finder.utils