Coverage report: 96%

Files Functions Classes

coverage.py v7.10.3, created at 2025-12-02 22:09 +0000

File statements missing excluded coverage
gemlib/__init__.py 6 0 0 100%
gemlib/deterministic/__init__.py 2 0 0 100%
gemlib/deterministic/ode_model.py 43 6 0 86%
gemlib/distributions/__init__.py 3 0 0 100%
gemlib/distributions/brownian.py 54 0 0 100%
gemlib/distributions/continuous_markov.py 87 0 0 100%
gemlib/distributions/continuous_time_state_transition_model.py 61 2 0 97%
gemlib/distributions/discrete_markov.py 107 1 0 99%
gemlib/distributions/discrete_time_state_transition_model.py 84 3 0 96%
gemlib/distributions/hypergeometric.py 65 16 0 75%
gemlib/distributions/hypergeometric_sampler.py 51 0 0 100%
gemlib/distributions/kcategorical.py 37 3 0 92%
gemlib/distributions/uniform_integer.py 45 2 0 96%
gemlib/func_util.py 15 0 0 100%
gemlib/math.py 29 1 0 97%
gemlib/mcmc/__init__.py 13 0 0 100%
gemlib/mcmc/adaptive_hmc.py 47 0 0 100%
gemlib/mcmc/adaptive_random_walk_metropolis.py 68 2 0 97%
gemlib/mcmc/discrete_time_state_transition_model/__init__.py 4 0 0 100%
gemlib/mcmc/discrete_time_state_transition_model/fixtures.py 8 0 0 100%
gemlib/mcmc/discrete_time_state_transition_model/left_censored_events_impl.py 78 3 0 96%
gemlib/mcmc/discrete_time_state_transition_model/left_censored_events_mh.py 44 0 0 100%
gemlib/mcmc/discrete_time_state_transition_model/left_censored_events_proposal.py 45 0 0 100%
gemlib/mcmc/discrete_time_state_transition_model/move_events.py 33 0 0 100%
gemlib/mcmc/discrete_time_state_transition_model/move_events_impl.py 136 6 0 96%
gemlib/mcmc/discrete_time_state_transition_model/right_censored_events_impl.py 107 4 0 96%
gemlib/mcmc/discrete_time_state_transition_model/right_censored_events_mh.py 40 0 0 100%
gemlib/mcmc/discrete_time_state_transition_model/right_censored_events_proposal.py 41 0 0 100%
gemlib/mcmc/hmc.py 35 1 0 97%
gemlib/mcmc/mcmc_sampler.py 22 0 0 100%
gemlib/mcmc/mcmc_util.py 11 0 0 100%
gemlib/mcmc/multi_scan.py 28 0 0 100%
gemlib/mcmc/mwg_step.py 54 2 0 96%
gemlib/mcmc/random_walk_metropolis.py 26 0 0 100%
gemlib/mcmc/sampling_algorithm.py 88 9 0 90%
gemlib/mcmc/test_util.py 19 0 0 100%
gemlib/mcmc/transformed_sampling_algorithm.py 41 0 0 100%
gemlib/prng_util.py 8 1 0 88%
gemlib/spatial/__init__.py 2 0 0 100%
gemlib/spatial/sp_dist.py 46 3 1 93%
gemlib/tensor_util.py 17 1 0 94%
gemlib/util.py 24 0 0 100%
Total 1774 66 1 96%

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