Installation

Python installation

The MEDfl package requires python 3.9 or more to be run. If you don’t have it installed on your machine, check out the following link Python It also requires MySQL database

Package Installation

For now, you can install the MEDfl package as follows:

git clone https://github.com/MEDomics-UdeS/MEDfl.git
cd MEDfl
pip install -e .

MySQL DB Configuration

MEDfl requires a MySQL DB connection, and this is in order to allow users to work with their own tabular datasets. We have created a bash script to install and configure a MySQL DB with phpMyAdmin monitoring system. Run the following command, then change your credentials in the MEDfl/scripts/base.py file:

sudo bash MEDfl/scripts/setup_mysql.sh