.bump2version.cfg
.gitignore
DESCRIPTION.md
LICENSE
MANIFEST.in
Makefile
README.md
agent.md
build.sh
deploy_to_pypi.sh
pyproject.toml
pytest.ini
requirements.txt
uv.lock
.cursor/rules/customer-facing-sdk.mdc
.cursor/rules/jobs-api-conventions.mdc
.github/dependabot.yml
.github/workflows/integration-tests.yml
.github/workflows/publish.yml
.github/workflows/python-package.yml
.github/workflows/release.yml
.idea/git_toolbox_prj.xml
.idea/misc.xml
.idea/modules.xml
.idea/python-library.iml
.idea/vcs.xml
.idea/runConfigurations/_template__of_pytest.xml
.idea/runConfigurations/_template__of_pytest2.xml
.vscode/launch.json
.vscode/settings.json
.vscode/tasks.json
backend/__init__.py
backend/build_backend.py
bin/release.py
bin/test_version_compatibility.py
pipebio/__init__.py
pipebio/attachments.py
pipebio/column.py
pipebio/entities.py
pipebio/install_deps.py
pipebio/jobs.py
pipebio/organization_lists.py
pipebio/pipebio_client.py
pipebio/sequences.py
pipebio/shareables.py
pipebio/uploader.py
pipebio/util.py
pipebio/workflows.py
pipebio.egg-info/PKG-INFO
pipebio.egg-info/SOURCES.txt
pipebio.egg-info/dependency_links.txt
pipebio.egg-info/requires.txt
pipebio.egg-info/top_level.txt
pipebio/annotate/AnnotateForBenchlingParams.py
pipebio/annotate/__init__.py
pipebio/annotate/params.py
pipebio/annotate/service_token_service.py
pipebio/annotate/sort.py
pipebio/annotate/users_service.py
pipebio/models/__init__.py
pipebio/models/attachment_type.py
pipebio/models/entity_types.py
pipebio/models/export_format.py
pipebio/models/field.py
pipebio/models/job_filter.py
pipebio/models/job_status.py
pipebio/models/job_type.py
pipebio/models/output_link.py
pipebio/models/render_codes.py
pipebio/models/sequence_document_kind.py
pipebio/models/sort.py
pipebio/models/table_column_type.py
pipebio/models/upload_detail.py
pipebio/models/upload_summary.py
pipebio/shared_python/__init__.py
pipebio/shared_python/environment_utils.py
pipebio/shared_python/exceptions.py
pipebio/shared_python/selection_range.py
pipebio/shared_python/util_no_dependencies.py
tests/__init__.py
tests/conftest.py
tests/test_helpers.py
tests/integration/__init__.py
tests/integration/annotate_for_benchling_itest.py
tests/integration/download_itest.py
tests/integration/jobs_itest.py
tests/integration/upload_itest.py
tests/sample_data/Readme.md
tests/sample_data/aa_database.tsv
tests/sample_data/test_sequences_aa.tsv
tests/sample_data/upload.tsv
tests/sample_data/adimab/137_adimab_VH.fsa
tests/sample_data/adimab/137_adimab_VL.fsa
tests/sample_data/adimab/944.full.pdf
tests/unit/__init__.py
tests/unit/sanitize_baseurl_test.py
tests/unit/test_client.py
tests/unit/test_jobs.py
tests/unit/uploader_test.py