LICENSE
README.md
pyproject.toml
setup.py
Rhapso/__init__.py
Rhapso.egg-info/PKG-INFO
Rhapso.egg-info/SOURCES.txt
Rhapso.egg-info/dependency_links.txt
Rhapso.egg-info/requires.txt
Rhapso.egg-info/top_level.txt
Rhapso/affine_fusion/__init__.py
Rhapso/affine_fusion/compute_bbox.py
Rhapso/affine_fusion/compute_grid.py
Rhapso/affine_fusion/fuse_cell.py
Rhapso/affine_fusion/generate_fusion_instructions.py
Rhapso/affine_fusion/initialize_output_zarr.py
Rhapso/affine_fusion/overlapping_blocks.py
Rhapso/affine_fusion/overlapping_views.py
Rhapso/data_prep/__init__.py
Rhapso/data_prep/n5_reader.py
Rhapso/data_prep/s3_big_stitcher_reader.py
Rhapso/data_prep/xml_to_dataframe.py
Rhapso/detection/__init__.py
Rhapso/detection/advanced_refinement.py
Rhapso/detection/difference_of_gaussian.py
Rhapso/detection/image_reader.py
Rhapso/detection/metadata_builder.py
Rhapso/detection/overlap_detection.py
Rhapso/detection/points_validation.py
Rhapso/detection/save_interest_points.py
Rhapso/detection/view_transform_models.py
Rhapso/evaluation/__init__.py
Rhapso/evaluation/detection_visualization.py
Rhapso/evaluation/matching_visualization.py
Rhapso/evaluation/ph_corr_qc.py
Rhapso/matching/__init__.py
Rhapso/matching/load_and_transform_points.py
Rhapso/matching/ransac_matching.py
Rhapso/matching/save_matches.py
Rhapso/matching/xml_parser.py
Rhapso/multiscale/__init__.py
Rhapso/multiscale/array_and_chunk_prep.py
Rhapso/multiscale/block_planner.py
Rhapso/multiscale/ome_metadata.py
Rhapso/multiscale/pyramid_executor.py
Rhapso/pipelines/__init__.py
Rhapso/pipelines/ray/__init__.py
Rhapso/pipelines/ray/affine_fusion.py
Rhapso/pipelines/ray/interest_point_detection.py
Rhapso/pipelines/ray/interest_point_matching.py
Rhapso/pipelines/ray/multiscale.py
Rhapso/pipelines/ray/solver.py
Rhapso/pipelines/ray/split_dataset.py
Rhapso/pipelines/ray/aws/__init__.py
Rhapso/pipelines/ray/aws/alignment_pipeline.py
Rhapso/pipelines/ray/aws/fusion_pipeline.py
Rhapso/pipelines/ray/aws/config/__init__.py
Rhapso/pipelines/ray/aws/config/dev/__init__.py
Rhapso/pipelines/ray/local/__init__.py
Rhapso/pipelines/ray/local/alignment_pipeline.py
Rhapso/pipelines/ray/local/fusion_pipeline.py
Rhapso/pipelines/ray/param/__init__.py
Rhapso/pipelines/ray/param/alignment/__init__.py
Rhapso/pipelines/ray/param/fusion/__init__.py
Rhapso/pipelines/ray/param/template/__init__.py
Rhapso/pipelines/ray/util/__init__.py
Rhapso/pipelines/ray/util/fusion_progress.py
Rhapso/solver/__init__.py
Rhapso/solver/compute_tiles.py
Rhapso/solver/concatenate_models.py
Rhapso/solver/connected_graphs.py
Rhapso/solver/data_prep.py
Rhapso/solver/global_optimization.py
Rhapso/solver/model_and_tile_setup.py
Rhapso/solver/pre_align_tiles.py
Rhapso/solver/save_results.py
Rhapso/solver/view_transforms.py
Rhapso/solver/xml_to_dataframe_solver.py
Rhapso/split_dataset/__init__.py
Rhapso/split_dataset/compute_grid_rules.py
Rhapso/split_dataset/save_points.py
Rhapso/split_dataset/save_xml.py
Rhapso/split_dataset/split_images.py
Rhapso/split_dataset/xml_to_dataframe_split.py
Rhapso/util/__init__.py
Rhapso/util/bdv_checkerboard_tile_colors.py
Rhapso/util/bdv_split_checkerboard.py
Rhapso/util/check_intensity_levels.py
Rhapso/util/check_multiscale.py
Rhapso/util/filter_tiles_from_xml.py
Rhapso/util/increase_overlap.py
Rhapso/util/ng_link_gen_z1.py
Rhapso/util/ng_tile_viewer_proteomics.py
Rhapso/util/single_channel_xml.py
Rhapso/util/sort+rename_xml_views.py
Rhapso/util/tile_analyzer.py
tests/__init__.py
tests/test_detection.py
tests/test_matching.py
tests/test_solving.py