## htsjdk.samtools.metrics.StringHeader
# CollectJumpingLibraryMetrics INPUT=[in/sample.bam] OUTPUT=picard/jump.jumping_metrics    MINIMUM_MAPPING_QUALITY=0 TAIL_LIMIT=10000 CHIMERA_KB_MIN=100000 VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false USE_JDK_DEFLATER=false USE_JDK_INFLATER=false
## htsjdk.samtools.metrics.StringHeader
# Started on: Sat Oct 24 21:43:17 HST 2026

## METRICS CLASS	picard.analysis.JumpingLibraryMetrics
JUMP_PAIRS	JUMP_DUPLICATE_PAIRS	JUMP_DUPLICATE_PCT	JUMP_LIBRARY_SIZE	JUMP_MEAN_INSERT_SIZE	JUMP_STDEV_INSERT_SIZE	NONJUMP_PAIRS	NONJUMP_DUPLICATE_PAIRS	NONJUMP_DUPLICATE_PCT	NONJUMP_LIBRARY_SIZE	NONJUMP_MEAN_INSERT_SIZE	NONJUMP_STDEV_INSERT_SIZE	CHIMERIC_PAIRS	FRAGMENTS	PCT_JUMPS	PCT_NONJUMPS	PCT_CHIMERAS
0	0	0	0	?	-0	491	8	0.016293	14903	271.264368	50.596091	0	4	0	1	0


