# AI Research OS — Fish shell completions
complete -c airos -f

complete -c airos -n '__fish_use_subcommand' -a 'search' -d 'Search indexed papers'
complete -c airos -n '__fish_use_subcommand' -a 'research' -d 'Autonomous research loop'
complete -c airos -n '__fish_use_subcommand' -a 'list' -d 'List indexed papers'
complete -c airos -n '__fish_use_subcommand' -a 'import' -d 'Add papers to database by ID'
complete -c airos -n '__fish_use_subcommand' -a 'export' -d 'Export DB to CSV or JSON'
complete -c airos -n '__fish_use_subcommand' -a 'stats' -d 'Database statistics'
complete -c airos -n '__fish_use_subcommand' -a 'status' -d 'Processing status and queue'
complete -c airos -n '__fish_use_subcommand' -a 'queue' -d 'Manage pending paper queue'
complete -c airos -n '__fish_use_subcommand' -a 'cache' -d 'Manage paper cache'
complete -c airos -n '__fish_use_subcommand' -a 'dedup' -d 'Find exact duplicates'
complete -c airos -n '__fish_use_subcommand' -a 'dedup-semantic' -d 'Semantic deduplication'
complete -c airos -n '__fish_use_subcommand' -a 'similar' -d 'Find semantically similar papers'
complete -c airos -n '__fish_use_subcommand' -a 'citations' -d 'Show citation relationships'
complete -c airos -n '__fish_use_subcommand' -a 'cite-graph' -d 'Citation graph analysis'
complete -c airos -n '__fish_use_subcommand' -a 'cite-import' -d 'Bulk import citations'
complete -c airos -n '__fish_use_subcommand' -a 'cite-fetch' -d 'Fetch citations from OpenAlex'
complete -c airos -n '__fish_use_subcommand' -a 'cite-stats' -d 'Citation graph statistics'
complete -c airos -n '__fish_use_subcommand' -a 'kg' -d 'Knowledge graph query and rebuild'
complete -c airos -n '__fish_use_subcommand' -a 'merge' -d 'Merge duplicate papers'
complete -c airos -n '__fish_use_subcommand' -a 'paper2code' -d 'Generate code from paper'
complete -c airos -n '__fish_use_subcommand' -a 'evoskill' -d 'EvoSkill benchmark'
complete -c airos -n '__fish_use_subcommand' -a 'rag' -d 'RAG pipeline'
complete -c airos -n '__fish_use_subcommand' -a 'visual' -d 'Extract figures/formulas from PDF'
complete -c airos -n '__fish_use_subcommand' -a 'watch' -d 'Watch papers.json and auto-rebuild KG'
