AGENTS.md
CHANGELOG.md
LICENSE
MANIFEST.in
README.md
pyproject.toml
requirements.txt
docs/api.md
docs/commensurate_validation.md
docs/current_progress.md
docs/features.md
docs/index.md
docs/performance.md
docs/release_checklist.md
docs/shortcuts.md
docs/unit_cell_aware_rotate.md
docs/design/ai_collaboration_figure.html
docs/design/constraint_guides_preview.html
docs/design/brand_assets/README.md
examples/basic.py
examples/constrained.py
examples/pro_demo.py
examples/readme_scenes.py
examples/relax.py
examples/commensurate_host_guest/README.md
examples/commensurate_host_guest/cu111_guest.extxyz
examples/commensurate_host_guest/expected.json
examples/commensurate_host_guest/graphene_host.extxyz
examples/commensurate_host_guest/mos2_guest.extxyz
examples/readme_scene_assets/README.md
examples/readme_scene_assets/ai_pyridinic_n3_li_graphene.traj
examples/readme_scene_assets/crowded_c60_relaxation.traj
examples/readme_scene_assets/cu111_oxygen_add_atoms.traj
examples/readme_scene_assets/cu2o111_on_cu111_pairwise_bonds.traj
examples/readme_scene_assets/ferrocene.traj
examples/readme_scene_assets/fixedline.traj
examples/readme_scene_assets/fixedplane.traj
examples/readme_scene_assets/graphene_hbn_commensurate.traj
examples/readme_scene_assets/hookean.traj
examples/readme_scene_assets/layered_water_channel.traj
examples/readme_scene_assets/material_presets.traj
examples/readme_scene_assets/phosphorene_twist_13p85deg.traj
examples/readme_scene_assets/rocksalt_vacancy_add_atoms.traj
examples/readme_scene_assets/showcase.traj
examples/readme_scene_assets/triclinic_bonded_si_add_atoms.traj
examples/readme_scene_assets/triclinic_nanoporous_add_atoms.traj
scripts/benchmark_large_trajectory.py
scripts/benchmark_large_volumetric.py
scripts/benchmark_structure_volumetric_planes.py
scripts/capture_readme_screenshots.py
v_ase/__init__.py
v_ase/_version.py
v_ase/add_atoms.py
v_ase/ai.py
v_ase/analysis.py
v_ase/atom_scalars.py
v_ase/builders.py
v_ase/calculator.py
v_ase/calculators.py
v_ase/cli.py
v_ase/colormaps.py
v_ase/commensurate.py
v_ase/export.py
v_ase/insertion_regions.py
v_ase/io.py
v_ase/neighbors.py
v_ase/notebook.py
v_ase/preferences.py
v_ase/project.py
v_ase/registry.py
v_ase/registry_relax.py
v_ase/relax.py
v_ase/remote.py
v_ase/repulsion.py
v_ase/serialization.py
v_ase/server.py
v_ase/session.py
v_ase/skills_v_ase.md
v_ase/viewer.py
v_ase/visualize.py
v_ase/volumetric.py
v_ase/websocket_manager.py
v_ase/skills/visualizing-atomic-structures-with-v-ase/SKILL.md
v_ase/skills/visualizing-atomic-structures-with-v-ase/agents/openai.yaml
v_ase/skills/visualizing-atomic-structures-with-v-ase/references/agent-setup.md
v_ase/skills/visualizing-atomic-structures-with-v-ase/references/cli-and-environments.md
v_ase/skills/visualizing-atomic-structures-with-v-ase/references/collaboration.md
v_ase/skills/visualizing-atomic-structures-with-v-ase/references/evaluation.md
v_ase/skills/visualizing-atomic-structures-with-v-ase/references/safety-and-errors.md
v_ase/skills/visualizing-atomic-structures-with-v-ase/references/semantic-api.md
v_ase/skills/visualizing-atomic-structures-with-v-ase/references/workflows-and-examples.md
v_ase/static/api.js
v_ase/static/index.html
v_ase/static/main.js
v_ase/static/renderer.js
v_ase/static/selection.js
v_ase/static/standalone.css
v_ase/static/standalone.html
v_ase/static/standalone.js
v_ase/static/style.css
v_ase/static/trajectory.js
v_ase/static/transform.js
v_ase/static/v_ase-logo.png
v_ase/static/workspace.css
v_ase/static/workspace.html
v_ase/static/workspace.js
v_ase/static/vendor/THREE_LICENSE
v_ase/static/vendor/three.module.js
v_ase_gui.egg-info/PKG-INFO
v_ase_gui.egg-info/SOURCES.txt
v_ase_gui.egg-info/dependency_links.txt
v_ase_gui.egg-info/entry_points.txt
v_ase_gui.egg-info/requires.txt
v_ase_gui.egg-info/top_level.txt