Metadata-Version: 2.1
Name: add_labels_to_fcs
Version: 0.4.0
Summary: Package for adding columns of data to FCS files as additional channels
Home-page: https://github.com/SimonsonLab/add-labels-to-fcs
Author: Paul D. Simonson
Description-Content-Type: text/markdown
License-File: LICENSE
Requires-Dist: pandas>=2.2
Requires-Dist: openpyxl>=3.1
Requires-Dist: numpy>=1.26
Requires-Dist: flowkit>=1.1

# add-labels-to-fcs

This repository includes code for adding data labels to FCS files as additional data channels.  It also adds labels a grid that can be gated in standard flow cytometry software.  The package is in active development, and more features will be added here.

## Installation


pip install add-labels-to-fcs


## Basic Usage

To add data columns (unmodified) to an FCS file using command line interface: 

add-labels-to-fcs file.fcs labels.xlsx new_file.fcs


To add data columns in a grid to facilitate gating using command line interface: 

add-labels-as-grid-to-fcs file.fcs labels.xlsx new_file.fcs


To use library functions in your own python scripts, import the following:

from add-labels-to-fcs import add_labels




