LICENSE
README.md
pyproject.toml
src/microflex/__init__.py
src/microflex.egg-info/PKG-INFO
src/microflex.egg-info/SOURCES.txt
src/microflex.egg-info/dependency_links.txt
src/microflex.egg-info/entry_points.txt
src/microflex.egg-info/requires.txt
src/microflex.egg-info/top_level.txt
src/microflex/analysis/__init__.py
src/microflex/analysis/diversity.py
src/microflex/cli/__init__.py
src/microflex/cli/main.py
src/microflex/core/__init__.py
src/microflex/core/base.py
src/microflex/core/config.py
src/microflex/core/exceptions.py
src/microflex/core/interfaces.py
src/microflex/core/types.py
src/microflex/functional/__init__.py
src/microflex/io/__init__.py
src/microflex/io/ab1_reader.py
src/microflex/io/biom_reader.py
src/microflex/io/fasta_reader.py
src/microflex/io/fastq_reader.py
src/microflex/io/format_detector.py
src/microflex/io/qza_reader.py
src/microflex/io/sequence_writer.py
src/microflex/io/taxonomy_writer.py
src/microflex/preprocess/__init__.py
src/microflex/preprocess/quality_filter.py
src/microflex/taxonomy/__init__.py
src/microflex/taxonomy/blast_classifier.py
src/microflex/taxonomy/mock_classifier.py
src/microflex/utils/__init__.py
src/microflex/visualization/__init__.py
tests/test_core.py