API_KEY_SETUP.md
LICENSE
MANIFEST.in
PUBLISHING_GUIDE.md
aibioagent.py
pyproject.toml
readme.md
requirements.txt
setup.py
agents/AI_scientist_agent.py
agents/Image_analyst_agent.py
agents/__init__.py
agents/base_agent.py
agents/paper_reviewer_agent.py
aibioagent.egg-info/PKG-INFO
aibioagent.egg-info/SOURCES.txt
aibioagent.egg-info/dependency_links.txt
aibioagent.egg-info/entry_points.txt
aibioagent.egg-info/not-zip-safe
aibioagent.egg-info/requires.txt
aibioagent.egg-info/top_level.txt
config/__init__.py
config/settings.py
config/prompts/imageanalyst_prompt.py
config/prompts/reviewer_prompt.py
config/prompts/router_prompt.py
config/prompts/scientist_prompt.py
core/__init__.py
core/analytics.py
core/debug_utils.py
core/embeddings.py
core/llm_client.py
core/memory_manager.py
core/rag_pipeline.py
core/router.py
core/smart_retriever.py
core/usage_tracker.py
data/__init__.py
data/document_loader.py
data/fiji_scraper.py
data/inspect_docling_result.py
data/preprocessors.py
data/utils_pdf.py
ui/__init__.py
ui/app_gradio.py