# macOS
.DS_Store
.AppleDouble
.LSOverride

# Python cache
__pycache__/
*.py[cod]
*$py.class

# Virtual environments
.venv/
venv/
env/

# IDE
.vscode/
.idea/

# Pytest & coverage
.pytest_cache/
.coverage
coverage.xml
htmlcov/
.test_artifacts*/

# Build artifacts
build/
dist/
*.egg-info/

# Logs
*.log

# Jupyter
.ipynb_checkpoints/

# --- Simulation outputs (generated at runtime) ---
# GA / HiSE run directories
runs_*/
run_*/
output/

# SAGE database files
*.sqlite
*.h5
db/
db_ro/

# Structure files generated during runs
enumerate*.xyz
config.xyz
*.traj
*.xyz.npz

# Generated plots / reports (add them to docs/ if you want them tracked)
*.png
*.svg
*.pdf
coverage_report.txt

# Hypothesis & ruff caches
.hypothesis/
.ruff_cache/

# Agentic / AI temporary files (Antigravity)
.gemini/
workflow.log
brain/

# Misc editor / OS
*.swp
scratch/
imgui.ini
*.xzi.npz

# Local backups
.backup_pre_ruff/
