biopython>=1.78
pysam>=0.19

[dev]
biopython
pysam
bumpver
pytest

[docs]
sphinx>=4.0
sphinx-autodoc-typehints
sphinx_rtd_theme

[lint]
flake8<5.0,>=3.8
mypy<1.0,>=0.900

[testing]
pytest>=6.0
