stlearn/__init__.py,sha256=_Til-E66XtlimKThxFIEgxZFvjJOyVukr0FJ2izaioQ,603
stlearn/_compat.py,sha256=ZxotpT5y81wwQ_R5mrhE9UQ2wA_ShpKMgMiYMKHQ54c,5285
stlearn/_settings.py,sha256=_BijfrMWmjcisV3otwcrjI5RIMRrEpx5NgqKmvhYz9w,15135
stlearn/add.py,sha256=3RKW-k8yNN8v0slyq8mvnC5xmzKgKxxmdUwuN9dp7So,667
stlearn/classes.py,sha256=ePBxDOHMg7LQFfEwTlry5GiAJ0-lVYXWNvMUD9Zler0,1308
stlearn/em.py,sha256=zowC0bfQDadDQr7SoiRuNoQJKr2jgp3sJTr7u_NxFQA,358
stlearn/gui.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
stlearn/logging.py,sha256=tfu1HG-FdvAP78_i74Q8JUmqBCZcPnFWN_DeJ22LjNM,10952
stlearn/pp.py,sha256=q2YO7ayvI-igyTnQ0yXgmQNK_dS_nbnhpt86hXGmPwI,629
stlearn/types.py,sha256=LIG3bpO9hzRYtMOWuDDGzghUmsGi3jCHWHI8qh9p6U8,306
stlearn/utils.py,sha256=rwrFcZIvdd4Amt3cGSmFfRzEIdB8lNWqSXMP51kDKIg,15419
stlearn/adds/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
stlearn/adds/_barcodes.py,sha256=KTJeiCf879qfhx09qGZSvEyRxS0qD9Sc94jr1t5rWck,915
stlearn/adds/add_deconvolution.py,sha256=oqtbSumpyJN2WfVrUKpvaoGLWmoAzpPFA1hmxm49i1c,882
stlearn/adds/add_loupe_clusters.py,sha256=iNSnxPIL6FjNy2SJrhSu_J3m8b_jO6xvMu-wHNv1Em8,1252
stlearn/adds/add_mask.py,sha256=51vWjFnnsQ5G33Pcks0uxj_1lJ0P-N0uJKO915gDqQY,5527
stlearn/adds/annotation.py,sha256=vvFrKuJL05F1OaZitSyPO3fE7SuX-VLWK6_6B77xioA,1172
stlearn/adds/image.py,sha256=vkfJBIg1YowlzeYjMeKG8QmcTXJh-uNWouHTHq8zWbU,2554
stlearn/adds/labels.py,sha256=O_98_kygyWxwfJxOYHACpgPz5G9l18bStEJY5K-RA78,1697
stlearn/adds/parsing.py,sha256=uUrpQk-y_n-yS7W2XyQ5yOS9cfQLTPZY92eYppJ9KKk,2308
stlearn/adds/polygon_annotations.py,sha256=tYQLXn8BrmtQ2oic9g2stlQa8mGhctgQ8_iUEEgc6og,1647
stlearn/adds/positions.py,sha256=fupmFm_4pMpMksA0WxIq7OP5yqD9Rqbg1xJiLLEAGCs,2215
stlearn/adds/row_annotations.py,sha256=SrHD0_KGvQV85yJZAXc6YMIGQVeLzkKloTmWH2BJ6rA,4024
stlearn/datasets/__init__.py,sha256=gdiqUu2iQdJ_wqb1N830t1yW8TM5TKRmRmt99QM49oc,192
stlearn/datasets/datasets.py,sha256=gbc4BtwBnzibRH8dwXCgPp00-9aENQLP1lxiFQgXbWw,16691
stlearn/embedding/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
stlearn/embedding/diffmap.py,sha256=F2vkzT-1dh3etGyXeu-8aES3nfzlVbTu_AV2ckPUucA,1719
stlearn/embedding/fa.py,sha256=l35_ISTtUw0c43hwOH0JmwoC7UTGNEJrS8pJktaLGyg,3859
stlearn/embedding/ica.py,sha256=mabmbAozmz-5TlHLI8ZB5_f224wa8upzz39cH1B2D9o,1955
stlearn/embedding/pca.py,sha256=clK2TG0XHfFq2MJeDNjTvdMH5A1b0crspLAMrgErPc0,3740
stlearn/embedding/umap.py,sha256=XskchG9xCBP6IncvxVXVoEqCyPCTz6BFvTA9NZ5pYJ8,2632
stlearn/image_preprocessing/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
stlearn/image_preprocessing/feature_extractor.py,sha256=2rwWJZ2cdUuKkjvw-J1XGFj1lFB7Ex6Zl2zCpfvmmXc,3585
stlearn/image_preprocessing/image_tiling.py,sha256=LZ1sBmM65TU-lcs0ArhG4ERb6BEONOWqgc8EIEPyS0c,4978
stlearn/image_preprocessing/model_zoo.py,sha256=kjFLchKx5FBCJiJKwR4ZrGo9o-ymSaHsZzJOvCmXbi8,3273
stlearn/io/__init__.py,sha256=7qqt7zJuvyK6pr2zGQKjJx1zhZABCv-Iui0QykvB52k,868
stlearn/io/checkpoint.py,sha256=k_19lZtpj5rDX9-8Hc9WllzmlHDhbNDRq82rFSQxbGU,866
stlearn/io/crop.py,sha256=UspolKfxaiWcEulJsXfxoNu1e4udnmM_XLPW1mRqeFA,3720
stlearn/io/generic.py,sha256=V4aH8sREhxnL8fqOJgQTC2xehxFN5HFXVabAz7Xg-ns,4500
stlearn/io/legacy.py,sha256=2E73ZEb_mzxPBQaTNgpPt3OIvqb2V4b8C0MWzgYOFm0,14562
stlearn/io/read.py,sha256=Bij52XW7YR5qNO_j9VWUHgP79iQ3LLCN6xseIosQd2s,10479
stlearn/io/spatialdata.py,sha256=yZbxNGvcd23kR5R5PzTm69nJXREdajkifviwT-RMyEs,19219
stlearn/pl/__init__.py,sha256=sMSDuqyUQqCjJhpT47g3aqe2XhhPZgIhGAWyxcdVMXc,1751
stlearn/pl/_docs.py,sha256=2XKV34wUDcCv1qP9pUAoIDnRf9StiolFGHtau7tswWI,4363
stlearn/pl/cci_plot.py,sha256=gB_XNpua0XIW81mQA2Pe-pYL3J2-zvdk1fhpdmVP7xI,53999
stlearn/pl/cci_plot_helpers.py,sha256=0wbykkEOjrpv52pgkq8yQZvhcdzqOTpMug0AO-NcJbk,23044
stlearn/pl/classes.py,sha256=UN0NDDpSgxS2UPLzreEezuwzCB15ApmFhf8_msEyfy8,39913
stlearn/pl/classes_bokeh.py,sha256=GHZ5V4ZU1SW158st2jlkbq-8IxGZknO4AhbDcP9jNOU,46636
stlearn/pl/cluster_plot.py,sha256=MPG5CAk3pi5pjC-gEiexHVlf-t_KXuxIOcSpezL5kjA,3665
stlearn/pl/deconvolution_plot.py,sha256=wjDbYM5o41M2gxolpxodf4FXXQlIDnV_pKDUsR7z6w4,4962
stlearn/pl/feat_plot.py,sha256=7X5KdRWNfYvV9dQNR50LMc9qlJHlqLg5AKVfaHL_xTs,2383
stlearn/pl/gene_plot.py,sha256=qTup_SGWMQ_tbtUVwauBD04hug0VPijr1FrUsadaLS4,2778
stlearn/pl/mask_plot.py,sha256=TcFrCIOB1BxLGGFGuTVT5nNPpVqXXZeVvZhvYZrmIIs,4835
stlearn/pl/non_spatial_plot.py,sha256=PaNQss4w5iB1BCvXRw_EbWRCyUuaFhuCim15yPbHV4s,1350
stlearn/pl/palettes_st.py,sha256=NweB2DTSYkC-xhOI7jIaDUPszpJhismbhTCFrjY0FGo,944
stlearn/pl/qc_plot.py,sha256=s2WfxSjknfU1BmUBV_T0HY6Kvv1pI5XX547tGtyUxng,4300
stlearn/pl/sd_plot.py,sha256=tZI54nRdqv9YMha88AnXKhkyg7NqwUJFmnHCbU5i93E,4125
stlearn/pl/stack_3d_plot.py,sha256=EPodJBHYicXunme1_gVASHqU1YPTlt24rgH5JKRWBpc,2223
stlearn/pl/subcluster_plot.py,sha256=ti1NGjsmdOsbSQr8dRdvWMtHaQ8R3HdyZxYxyMAM8no,2412
stlearn/pl/utils.py,sha256=i282yyQkAHsYklDQamkJCpeiszteKTMHLZWNfoZTh2M,7825
stlearn/pl/trajectory/__init__.py,sha256=KDXdY1M2UeE0qkoZz9JtZdjVSbOT0HzUdsIKfSbNfUM,463
stlearn/pl/trajectory/check_trajectory.py,sha256=t7cwWfvXRa316No1ZBR2LsRO43wc8GB0iSN-s8K0KlI,4499
stlearn/pl/trajectory/de_transition_plot.py,sha256=-9D_8ocl2mP5Iv5vg3toHFLdX_bpq7pjWLojwtnHjjQ,7395
stlearn/pl/trajectory/local_plot.py,sha256=uDF5DTJzEQCjSGET4my__bbKyDcFrhb-bqgPZOOL-Gc,6485
stlearn/pl/trajectory/pseudotime_plot.py,sha256=AdAAoHWKe6Qx4EB9hvQWskZdTk5UKjMUXIZdJ7kuYx8,6426
stlearn/pl/trajectory/transition_markers_plot.py,sha256=CAyTMmImdSVBGfkguWlzpUiZsNhm6FJn7Fjy0jHcQcU,4477
stlearn/pl/trajectory/tree_plot.py,sha256=QFjpWEqvol8SHIbGdfpOWYRtYxXgLWN30ZnHcvb1ThY,6493
stlearn/pl/trajectory/utils.py,sha256=lf0FWocr-LTIPbai8O8tb12pPI7PS-pK6JIbrcLkVEw,362
stlearn/preprocessing/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
stlearn/preprocessing/filter_cells.py,sha256=d9MLehEoe4c-cUTqVPoV-B41kb9boac4h7jdxd2W6J4,1970
stlearn/preprocessing/filter_genes.py,sha256=AW3Dxf2PwM1Q7R12jwGCJD7fQ95zJDpbBHvx8sd3vhQ,1951
stlearn/preprocessing/graph.py,sha256=uRLrO2l5frVuepYE7RjKZ5GTUWJ8GZBbU5Ya1tClbug,3800
stlearn/preprocessing/highly_variable_gene.py,sha256=tBxUzT21zKzFu7xH1vG-aC7N57568giYHRLO5IgGcE0,3294
stlearn/preprocessing/log_scale.py,sha256=hmHRCUpdfLdS7RDkRtq2S9iMjOPKnRZdruyQi1qIQMU,2650
stlearn/preprocessing/normalize.py,sha256=Lr6mI7PqKzu9zoagMX2VnEvFPJhBlkikd_2w5iogz5M,2600
stlearn/spatial/__init__.py,sha256=--lzRR-qndlJ8ZOxBc-laq0sh0Q8eT7zWvCjmVFpOZY,187
stlearn/spatial/clustering/__init__.py,sha256=8EU4wpr_CwrO3NGa5aC4uXCjFci2Uyu6Fq9mFRtMHmw,74
stlearn/spatial/clustering/localization.py,sha256=v7Nfh3mAyXF7KbPoAN0CD2Udsm6kUTfLk5xJPxnlaUI,2715
stlearn/spatial/morphology/__init__.py,sha256=ewnUIT2Nw9ZybbCo1hNgfhF4zzaAXMdCDFYpXnX1sXY,56
stlearn/spatial/morphology/adjust.py,sha256=-7L1K7MKt6k5ltnhyUde8nV1L1Le-TqwAU6j_3SvdYE,5130
stlearn/spatial/sme/__init__.py,sha256=ZdLeyODCImQXxozKJAuNgBKEfLV8_urrEadr0BhOmyM,189
stlearn/spatial/sme/_adjust.py,sha256=GBFZpZ-qQ0149RDlVAektx0sp5Z16iRIAb5aeWSMY5E,3181
stlearn/spatial/sme/_weighting_matrix.py,sha256=8m3yet0FQFhVKvhViaVxe3XuBvIrUCd9ZKQjxkSZUCg,13865
stlearn/spatial/sme/pseudo_spot.py,sha256=WLIi49ZIXWH2Ysi4Uo-BiP9-9rs6GACj69gbySnQ3yY,8788
stlearn/spatial/sme/sme_impute0.py,sha256=sQRWLnazCA699J05WagBiUuZaadyolps47fCwLMY94c,2502
stlearn/spatial/sme/sme_normalize.py,sha256=S-ba6ziU4_I7Fr8n44itUhROjZ0YAEyBBYn6eqc-kwM,2712
stlearn/spatial/smooth/__init__.py,sha256=ulf95xHrApMpF9U2CXSqMijvL3ftrqPAhNj9wb1BggM,50
stlearn/spatial/smooth/disk.py,sha256=uPRF3gw3Suvu4hLzcSlTNyrdKbWB4Q3tZ2JQTBDPjS8,1665
stlearn/spatial/trajectory/__init__.py,sha256=TMVIr2Rr6gbqNwHlDd0jHC9MU4U7eW-iGhkQ11hSJzs,992
stlearn/spatial/trajectory/compare_transitions.py,sha256=gpGlUayVnTHgCFAT5-NvYgDy9_DFTkvb1NC5wF0jI4A,1500
stlearn/spatial/trajectory/detect_transition_markers.py,sha256=r9eYiFAxp-Jq_TODztueC5piv0t902jVhd2Qo_y2HJQ,5671
stlearn/spatial/trajectory/global_level.py,sha256=00j6Vcoa5Kh9qii7ZvJ13je3NmQCygY6eMF4m6bOtJM,7603
stlearn/spatial/trajectory/local_level.py,sha256=dpxnHf6FytFznmQIt12Y6xCpTkQ8Ur9C6vHBxhcEoG0,2844
stlearn/spatial/trajectory/pseudotime.py,sha256=4X_eAOqBHqjBlr7dGrscz_-ooSPUuShM_pOZcUeLTD8,8610
stlearn/spatial/trajectory/pseudotimespace.py,sha256=2APK_6mtUqK3d18mJo7Dj50froDG-XFRvtn_Fr2iCiE,3189
stlearn/spatial/trajectory/set_root.py,sha256=xktowHQ3n4EAc74YeS1gMMY-vfqTlXZZ9VxlpDquexg,2025
stlearn/spatial/trajectory/shortest_path_spatial_paga.py,sha256=e-MVT8fLsdISGH5ARHjCEjFHczHv2mDeTpB5DLmJkKQ,4992
stlearn/spatial/trajectory/utils.py,sha256=QWui-UqX7Y08IB1Rz1-1SqWbIYtIXV7Fw_qmu5-BFQs,20485
stlearn/spatial/trajectory/weight_optimization.py,sha256=VeeUshA7ha6AozHyrTEYimC74Aeoh3mdz_LpzxSv56E,6373
stlearn/tl/__init__.py,sha256=Ss313USIhnCuCHRHVEMhVFkx35q_thcA3LtMrxB_dKE,140
stlearn/tl/cache/__init__.py,sha256=nUV9SJNPLnI7cdsBCO9fBnUAHF--tWZ9fNgqROgGxiw,131
stlearn/tl/cache/anndata.py,sha256=AKcyAukRsKbepkVqU0om0rwRM94-pBvNznBEodP80_c,1646
stlearn/tl/cci/__init__.py,sha256=Bc1Z4SXLUfoUo_g3ULnUKqSoGNyP9ZCKsDQ9tSlm0gM,469
stlearn/tl/cci/_results.py,sha256=gOcGd-RScwUe6CXlmmpXXLbQTTO2LIkNOc1R0dRKKtE,9083
stlearn/tl/cci/analysis.py,sha256=9SEBQcZ8gVnMwPJWkfkioeMvD3voB30IZPadyETseEs,26546
stlearn/tl/cci/edges.py,sha256=rIOueWuv0qY4Mwlm2PUcGNaCapR2ipJum6oAVrN4IV8,5564
stlearn/tl/cci/go.R,sha256=5Q9e865jzPLZucpjsvlmbzsLO6mqJHY7fhPyBFMbbYw,1228
stlearn/tl/cci/go.py,sha256=fiUsiofEfS9qxW47Fqt6vX3-5t_xdkI7vZkAnZVTKdc,1128
stlearn/tl/cci/gridding.py,sha256=XmnSjQRwAUhY0-ADuK27PClAOUzCXsCtlE00R70Zbq8,9004
stlearn/tl/cci/het.py,sha256=KKjQN2-UjRGmqqpfQ1xboU6IxwgtsY7zGEkteiPGcBY,8906
stlearn/tl/cci/ligand_receptors.py,sha256=Of0Rjr_p86ZWUGQ-PJy3_qzfZaH95rym3Ix1IiIH13Y,18919
stlearn/tl/cci/neighbours.py,sha256=X8pBHAPBvfxeS-TBg2rPsMaGWzX7oG4lFG5twgSwaB4,6580
stlearn/tl/cci/perm_utils.py,sha256=svF_YSxX-FaP8p143x2NEG-fi6d0yppV_R8rhFaBNLg,11649
stlearn/tl/cci/permutation.py,sha256=VoHJhIC-uTbQ6v0p6z9OTb8Cgwe5_rBDkT0cAn3oj0M,10382
stlearn/tl/cci/r_helpers.py,sha256=vMG0Ywmh6KNg7H1N66t2gmUeO-HNvkxBhQuRWJ9SsvA,503
stlearn/tl/cci/scoring.py,sha256=H08aMDg-DT9rdLby7ohV4fxaQ0KEVO2vJBFumAIgMEg,14886
stlearn/tl/cci/databases/ConnectomeDB2025_human.csv,sha256=2lpxO2FaPU3ybT2VCC0JuS4n8VP8G4-zXF1Sl6SwBPM,1436980
stlearn/tl/cci/databases/ConnectomeDB2025_mouse.csv,sha256=E2ZejJMCePa0CyCgdEbXHQuFYTPA_PvFyTxgku1_jNQ,1427322
stlearn/tl/cci/databases/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
stlearn/tl/cci/databases/connectomeDB2020.tsv,sha256=oWdQDFyTZ2w2sKDHKSSjnUvRcFtozt7laczvzRM5NuM,136758
stlearn/tl/clustering/__init__.py,sha256=HjXiOZ-dYaOecvgbwFQsTdRSU0wI1geMdaj7lp12eqw,168
stlearn/tl/clustering/annotate.py,sha256=T_-mZ9nbwu605evb3onEi6wUZU4FINM84Pkil-lqSLI,438
stlearn/tl/clustering/kmeans.py,sha256=pov_ZIC0rhqcU_xsn4gcdBcMJWIoDM2IX50NgJhK-s8,3151
stlearn/tl/clustering/leiden.py,sha256=mYFcBsosB46zh2InAnj1AD6eeYgxh9R-Je3A3e0yijU,3633
stlearn/tl/label/__init__.py,sha256=y4JuMyGIKF2secF_FXgYil5KE5ct17-YjJYp2W9XbAA,139
stlearn/tl/label/label.py,sha256=ScQy638IU1rjXJf3asowjxnTCrg0JdNFFa1VHOoDrZk,10221
stlearn/tl/label/label_transfer.R,sha256=gPfiRAnjVIkjtyPlLsWj5T-iPjJSTuHYahWZHpo19os,2505
stlearn/tl/label/rctd.R,sha256=lMql6uARlpaY7-8ammd_8EN1sPHC3O4-mAqXQ8vNnSk,2029
stlearn/tl/label/singleR.R,sha256=zSvWLY-h02XdF9FlBxxzkzNhEKKX_6kPDwuuOl9Bon4,931
stlearn/wrapper/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
stlearn/wrapper/concatenate_spatial_adata.py,sha256=KgXEHnq6sgpjtOc2z0iPGBGWqDlnzlUmstkxyX-Onc4,5722
stlearn/wrapper/convert_scanpy.py,sha256=5TdCOKpNXOPLK6x1FZiJ_ZLV7YTwEIlUUNKgijLnSC8,636
stlearn-1.5.0.dist-info/licenses/LICENSE,sha256=p1eTL6LjLgUFAEZ3Xoci0rEvEGuoRNknqO3IKmbRDFU,1529
stlearn-1.5.0.dist-info/METADATA,sha256=1KHHJE4hhMeb5QgJaDWaoEZn1H6v9RxxDyP8SfOHtkI,6027
stlearn-1.5.0.dist-info/WHEEL,sha256=mOdXR9C3wMVov7cSY8PY-XCzo3SmmWCHvGQr5csJoao,91
stlearn-1.5.0.dist-info/top_level.txt,sha256=xBpAlG3urUbIV14YdqDBj77HJNhRE08j1TmF6hiOEhc,8
stlearn-1.5.0.dist-info/RECORD,,
