# Minimal optional wrapper; not an executed workflow qualification.
rule all:
    input: "results/result.tsv", "results/quality_summary.json"

rule kaks:
    input: "pairs.axt"
    output: "results/result.tsv", "results/quality_summary.json"
    threads: 2
    shell:
        "kaksturbo run --input {input:q} --output results --backend cpu --threads {threads}"
