LICENSE
README.md
pyproject.toml
src/focus3d/__init__.py
src/focus3d/_reader.py
src/focus3d/_sample_data.py
src/focus3d/_version.py
src/focus3d/_widget.py
src/focus3d/_writer.py
src/focus3d/napari.yaml
src/focus3d/analysis/analysis.py
src/focus3d/basic/curation.py
src/focus3d/segmentation/mask2former_adapter.py
src/focus3d/segmentation/seg_io.py
src/focus3d/segmentation/segmentation.py
src/focus3d/segmentation/FOCUS3D/LICENSE
src/focus3d/segmentation/FOCUS3D/click_inference.py
src/focus3d/segmentation/FOCUS3D/cog.yaml
src/focus3d/segmentation/FOCUS3D/fine_tune.py
src/focus3d/segmentation/FOCUS3D/inference.py
src/focus3d/segmentation/FOCUS3D/inference_win.py
src/focus3d/segmentation/FOCUS3D/train_net_3d.py
src/focus3d/segmentation/FOCUS3D/configs/3d_test copy.yaml
src/focus3d/segmentation/FOCUS3D/configs/3d_test.yaml
src/focus3d/segmentation/FOCUS3D/configs/3d_test_all.yaml
src/focus3d/segmentation/FOCUS3D/mask2former/__init__.py
src/focus3d/segmentation/FOCUS3D/mask2former/config.py
src/focus3d/segmentation/FOCUS3D/mask2former/config_win.py
src/focus3d/segmentation/FOCUS3D/mask2former/maskformer_model.py
src/focus3d/segmentation/FOCUS3D/mask2former/maskformer_model_win.py
src/focus3d/segmentation/FOCUS3D/mask2former/data/data_mapper.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/__init__.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/criterion.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/criterion_win.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/matcher.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/point_features_3d.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/__init__.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/engine_pretrain.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/mae3d_backbone.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/mae3d_backbone_win.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/models_mae.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/models_mae_win.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/util/crop.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/util/datasets.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/util/lars.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/util/lr_decay.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/util/lr_sched.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/util/misc.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/util/pos_embed.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/vitadapter/__init__.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/vitadapter/adapter_modules.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/vitadapter/adapter_modules_win.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/vitadapter/unet_parts.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/vitadapter/vitadapter.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/vitadapter/vitadapter_win.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/vitadapter/ops/setup.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/vitadapter/ops/test.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/vitadapter/ops/functions/__init__.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/vitadapter/ops/functions/ms_deform_attn_func.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/vitadapter/ops/modules/__init__.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/vitadapter/ops/modules/ms_deform_attn.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/backbone/vitadapter/util/pos_embed.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/pixel_decoder/__init__.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/pixel_decoder/fpn3d.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/pixel_decoder/fpn3d_win.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/pixel_decoder/msdeformattn3d.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/pixel_decoder/msdeformattn3d_win.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/pixel_decoder/ops/setup.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/pixel_decoder/ops/test.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/pixel_decoder/ops/functions/__init__.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/pixel_decoder/ops/functions/ms_deform_attn_func.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/pixel_decoder/ops/modules/__init__.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/pixel_decoder/ops/modules/ms_deform_attn.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/transformer_decoder/__init__.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/transformer_decoder/mask2former_transformer_decoder_3d.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/transformer_decoder/mask2former_transformer_decoder_3d_win.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/transformer_decoder/position_encoding_3d.py
src/focus3d/segmentation/FOCUS3D/mask2former/modeling/transformer_decoder/transformer_3d.py
src/focus3d/segmentation/FOCUS3D/mask2former/utils/__init__.py
src/focus3d/segmentation/FOCUS3D/mask2former/utils/misc.py
src/focus_3d.egg-info/PKG-INFO
src/focus_3d.egg-info/SOURCES.txt
src/focus_3d.egg-info/dependency_links.txt
src/focus_3d.egg-info/entry_points.txt
src/focus_3d.egg-info/requires.txt
src/focus_3d.egg-info/top_level.txt
tests/test_reader.py
tests/test_sample_data.py
tests/test_widget.py
tests/test_writer.py