Metadata-Version: 2.4
Name: rcsb.workflow
Version: 0.64
Summary: RCSB Python data processing and ETL/ELT workflow entry points
Project-URL: Homepage, https://github.com/rcsb/py-rcsb_workflow
Author-email: John Westbrook <john.westbrook@rcsb.org>
Maintainer-email: Dennis Piehl <dennis.piehl@rcsb.org>, Michael Trumbull <michael.trumbull@rcsb.org>, James Smith <james.smith@rcsb.org>
License-Expression: Apache-2.0
License-File: LICENSE
Classifier: Development Status :: 5 - Production/Stable
Classifier: Intended Audience :: Developers
Classifier: Natural Language :: English
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.12
Requires-Python: >=3.9
Requires-Dist: mmcif>=1.0.0
Requires-Dist: openeye-toolkits>=2024.1.1
Requires-Dist: rcsb-db>=1.812
Requires-Dist: rcsb-exdb>=1.31
Requires-Dist: rcsb-utils-chem>=0.84
Requires-Dist: rcsb-utils-io>=1.49
Requires-Dist: rcsb-utils-seq>=0.84
Requires-Dist: rcsb-utils-seqalign>=0.32
Requires-Dist: rcsb-utils-targets>=0.83
Requires-Dist: requests>=2.32.3
Provides-Extra: tests
Requires-Dist: black>=21.5b1; extra == 'tests'
Requires-Dist: check-manifest; extra == 'tests'
Requires-Dist: coverage; extra == 'tests'
Requires-Dist: flake8; extra == 'tests'
Requires-Dist: pylint; extra == 'tests'
Requires-Dist: tox; extra == 'tests'
Description-Content-Type: text/markdown

# py-rcsb_workflow

[![Build Status](https://dev.azure.com/rcsb/RCSB%20PDB%20Python%20Projects/_apis/build/status/rcsb.py-rcsb_workflow?branchName=master)](https://dev.azure.com/rcsb/RCSB%20PDB%20Python%20Projects/_build/latest?definitionId=21&branchName=master)

## Introduction

RCSB Python workflow entry points for data processing and ETL/ELT operations.

### Installation

Download the library source software from the project repository:

```bash

git clone  --recurse-submodules https://github.com/rcsb/py-rcsb_workflow.git

# or to make sure the submodules are updated --
git submodule update --recursive --init
git submodule update --recursive --remote

```

Optionally, run test suite (Python versions >= 3.9) using
[tox](http://tox.readthedocs.io/en/latest/example/platform.html):

```bash
tox
```

Installation is via the program [pip](https://pypi.python.org/pypi/pip).
```bash
pip install rcsb.workflow --extra-index-url https://pypi.anaconda.org/OpenEye/simple
```

To run tests from the source tree, the package must be installed in editable mode (i.e. -e):
```bash
pip install -e . --extra-index-url https://pypi.anaconda.org/OpenEye/simple

# or using uv

uv pip install -e .
```
