Metadata-Version: 2.4
Name: compartmentModel
Version: 1.3
Summary: A command line utility to estimate parameters for Compartment Model. For more details see documentation and Dutta et al, Gen Res, 2023.
Home-page: https://github.com/guertinlab
Author: Lab of Michael J. Guertin
Author-email: guertin@uchc.edu
License: MIT
Description-Content-Type: text/markdown
Requires-Dist: Click
Requires-Dist: pandas
Requires-Dist: configparser
Requires-Dist: PyYAML
Requires-Dist: tqdm
Requires-Dist: numpy
Requires-Dist: scipy
Requires-Dist: matplotlib
Dynamic: author
Dynamic: author-email
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# Polcomp: compartment model as a command-line interface

A command line utility to estimate parameters for Compartment Model. For more details, please refer to documentation and Dutta et al, Gen Res, 2023

Direct install: `pip install compartmentModel`.

Installation steps (virtual environment `venv` not needed but recommended):
- cd /path/to/your/directory
- python3 -m venv compModelEnv ## create your environment
- source compModelEnv/bin/activate ## activate your environment
- python3 -m pip install compartmentModel ## can directly install this without venv steps above

Quick start/user guide: 

Vignette: https://guertinlab.github.io/compartment_model/compModel_vignette/compartmentModel_vignette.html

Package: https://pypi.org/project/compartmentModel/
 

Package building (in case you are downloading/cloning the entire package source files):
- python3 -m pip install build 
- python3 -m build
- python3 -m pip install twine
- python3 -m twine check dist/* 
- python3 -m twine upload -r pypi dist/*

