pyensembl>=2.27.2
# Varcode 10 is the tested major version (CI and the suite run on 10.x).
# 10.5.2 honors an Ensembl release in --genome (GRCh38:93 or GRCh38.93) instead
# of silently using the latest release.
varcode>=10.12.0,<11
pandas>=0.23.0
pysam>=0.15.2
edlib>=1.3.9.post1,<2

# Reads Isovar's packaged Sid test reads and makes them again, and acquires regions
# for research audits.
osteosarc>=0.15.5,<0.16

# Shared species-scoped ORF models and reference MS observations.
orfdata>=0.1.0,<1
