README.md
pyproject.toml
labpilot_ai/__init__.py
labpilot_ai/__main__.py
labpilot_ai/bootstrap_labscript.py
labpilot_ai/label.png
labpilot_ai/main.py
labpilot_ai.egg-info/PKG-INFO
labpilot_ai.egg-info/SOURCES.txt
labpilot_ai.egg-info/dependency_links.txt
labpilot_ai.egg-info/entry_points.txt
labpilot_ai.egg-info/requires.txt
labpilot_ai.egg-info/top_level.txt
labpilot_ai/ai/__init__.py
labpilot_ai/ai/co_sequence_prompt.py
labpilot_ai/ai/command_schema.py
labpilot_ai/ai/error_advisor.py
labpilot_ai/ai/json_parser.py
labpilot_ai/ai/llm_client.py
labpilot_ai/ai/prompt_builder.py
labpilot_ai/ai/protocol_designer.py
labpilot_ai/ai/protocol_importer.py
labpilot_ai/analysis/__init__.py
labpilot_ai/analysis/fit_models.py
labpilot_ai/analysis/plotting.py
labpilot_ai/analysis/report_generator.py
labpilot_ai/app/__init__.py
labpilot_ai/app/error_center.py
labpilot_ai/app/main_window.py
labpilot_ai/app/theme.py
labpilot_ai/blacs_bridge/__init__.py
labpilot_ai/blacs_bridge/accessor.py
labpilot_ai/blacs_bridge/introspection.py
labpilot_ai/blacs_bridge/plugin.py
labpilot_ai/blacs_ctrl/__init__.py
labpilot_ai/blacs_ctrl/connection_table_discovery.py
labpilot_ai/blacs_ctrl/manual_bridge_server.py
labpilot_ai/blacs_ctrl/manual_client.py
labpilot_ai/co_sequence/__init__.py
labpilot_ai/co_sequence/log_store.py
labpilot_ai/co_sequence/patch_validator.py
labpilot_ai/config/__init__.py
labpilot_ai/config/registry_editor.py
labpilot_ai/config/settings_manager.py
labpilot_ai/directory/__init__.py
labpilot_ai/directory/labscript_paths.py
labpilot_ai/directory/path_registry.py
labpilot_ai/experiment_log/__init__.py
labpilot_ai/experiment_log/generator.py
labpilot_ai/knowledge/__init__.py
labpilot_ai/knowledge/context_builder.py
labpilot_ai/knowledge/indexer.py
labpilot_ai/knowledge/search.py
labpilot_ai/lyse_ctrl/__init__.py
labpilot_ai/lyse_ctrl/h5_loader.py
labpilot_ai/lyse_ctrl/lyse_results_reader.py
labpilot_ai/lyse_ctrl/lyse_script_runner.py
labpilot_ai/lyse_ctrl/lyse_script_worker.py
labpilot_ai/lyse_ctrl/module_manager.py
labpilot_ai/lyse_ctrl/multi_runner.py
labpilot_ai/lyse_ctrl/registry_autoscan.py
labpilot_ai/lyse_ctrl/result_store.py
labpilot_ai/lyse_ctrl/single_runner.py
labpilot_ai/optimizer/__init__.py
labpilot_ai/optimizer/auto_loop.py
labpilot_ai/optimizer/base.py
labpilot_ai/optimizer/bayesian.py
labpilot_ai/optimizer/experiment_loop.py
labpilot_ai/optimizer/grid_search.py
labpilot_ai/optimizer/history.py
labpilot_ai/optimizer/lyse_feedback.py
labpilot_ai/optimizer/objective.py
labpilot_ai/protocol/__init__.py
labpilot_ai/protocol/protocol_store.py
labpilot_ai/runmanager_ctrl/__init__.py
labpilot_ai/runmanager_ctrl/backend.py
labpilot_ai/runmanager_ctrl/globals_h5.py
labpilot_ai/runmanager_ctrl/scan_builder.py
labpilot_ai/runmanager_ctrl/sequence_variable_discovery.py
labpilot_ai/runmanager_ctrl/write_router.py
labpilot_ai/safety/__init__.py
labpilot_ai/safety/audit_log.py
labpilot_ai/safety/validator.py
labpilot_ai/storage/__init__.py
labpilot_ai/storage/database.py
labpilot_ai/templates/configs/blacs_manual_registry.yaml
labpilot_ai/templates/configs/global_registry.yaml
labpilot_ai/templates/configs/lyse_registry.yaml
labpilot_ai/templates/configs/project_settings.yaml
labpilot_ai/templates/configs/safety_rules.yaml
labpilot_ai/templates/configs/voice_lexicon.yaml
labpilot_ai/templates/manual/README.md
labpilot_ai/templates/manual/00_overview/architecture.md
labpilot_ai/templates/manual/00_overview/project_structure.md
labpilot_ai/templates/manual/00_overview/quick_start.md
labpilot_ai/templates/manual/01_voice/cpu_gpu_stt.md
labpilot_ai/templates/manual/01_voice/cuda_troubleshooting.md
labpilot_ai/templates/manual/01_voice/lexicon_terms.md
labpilot_ai/templates/manual/01_voice/manual_recording.md
labpilot_ai/templates/manual/01_voice/wake_standby.md
labpilot_ai/templates/manual/02_ui/co_sequence.md
labpilot_ai/templates/manual/02_ui/command_diagnostics.md
labpilot_ai/templates/manual/02_ui/industrial_ui.md
labpilot_ai/templates/manual/03_safety_ai/action_schema.md
labpilot_ai/templates/manual/03_safety_ai/llm_client.md
labpilot_ai/templates/manual/03_safety_ai/safety_validator.md
labpilot_ai/templates/manual/04_labscript_interfaces/blacs.md
labpilot_ai/templates/manual/04_labscript_interfaces/lyse_data.md
labpilot_ai/templates/manual/04_labscript_interfaces/runmanager.md
labpilot_ai/templates/manual/05_analysis_optimizer/optimizer.md
labpilot_ai/templates/manual/05_analysis_optimizer/plotting_fitting.md
labpilot_ai/templates/manual/05_analysis_optimizer/protocol_designer.md
labpilot_ai/templates/manual/05_analysis_optimizer/protocol_report.md
labpilot_ai/templates/manual/06_configuration/directory.md
labpilot_ai/templates/manual/06_configuration/knowledge_sources.md
labpilot_ai/templates/manual/06_configuration/registry_editor.md
labpilot_ai/templates/manual/06_configuration/settings_and_registries.md
labpilot_ai/templates/manual/06_configuration/voice_settings.md
labpilot_ai/templates/manual/07_development/error_center.md
labpilot_ai/templates/manual/07_development/experiment_log.md
labpilot_ai/templates/manual/07_development/package_templates.md
labpilot_ai/templates/manual/07_development/packaging.md
labpilot_ai/templates/manual/07_development/tests.md
labpilot_ai/templates/plugins/multi_modules/example_multi.py
labpilot_ai/templates/plugins/single_modules/example_single.py
labpilot_ai/utils/__init__.py
labpilot_ai/utils/json_utils.py
labpilot_ai/utils/paths.py
labpilot_ai/voice/__init__.py
labpilot_ai/voice/cuda_paths.py
labpilot_ai/voice/diagnostics.py
labpilot_ai/voice/lexicon.py
labpilot_ai/voice/recorder.py
labpilot_ai/voice/stt_backend.py
labpilot_ai/voice/stt_worker.py
labpilot_ai/voice/tts_backend.py
labpilot_ai/voice/vad.py
labpilot_ai/voice/wake_agent.py
tests/test_analysis_results.py
tests/test_auto_loop.py
tests/test_blacs_bridge.py
tests/test_blacs_client_bridge_status.py
tests/test_blacs_connection_table_discovery.py
tests/test_blacs_real_bridge_accessor.py
tests/test_co_sequence_directory_experiment_log.py
tests/test_error_center.py
tests/test_knowledge.py
tests/test_lyse_modules.py
tests/test_objective.py
tests/test_optimizer.py
tests/test_paths.py
tests/test_protocol_importer.py
tests/test_registry_editor.py
tests/test_release_hardening.py
tests/test_runmanager_globals_h5.py
tests/test_safety.py
tests/test_sequence_variable_discovery.py
tests/test_ui_imports.py
tests/test_voice.py