hdbscan>=0.8.28
matplotlib>=3.5.0
numpy>=1.21.0
pandas>=1.3.0
pysam>=0.18.0
rich-click>=1.5.0
torch>=1.11.0
loguru>=0.6.0
scikit-learn>=1.0.0
tqdm>=4.62.0
umap-learn>=0.5.0
xgboost>=1.6.0
joblib>=1.1.0
psutil>=5.8.0

# Optional GPU dependencies
# Install with: pip install -r requirements.txt -r requirements-gpu.txt
# cuml>=22.04.0
# cudf>=22.04.0
# cupy-cuda11x>=9.0.0
